| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_3125 |
|---|
| Symbol | |
|---|
| ID | 8378820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3539183 |
|---|
| End bp | 3541768 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645002360 |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_003159616 |
|---|
| Protein GI | 256830888 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | [TIGR00593] DNA polymerase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGC AAACAAGGCT CGGACTGAAA ACCGAGCCGC TTTTTTTGAT CGACGGTCAC
GCCTTCATCT ATCGCGGTTT CTACGCATAC CCCGATTTCA AGCGCTCCGA CGGGTTTCCG
ACCAGCGCCA TGTATATCGT CTTCAAGCTG GTCCTCAGGC TCCTGCGCGA AGAGAATCCG
TCCCACCTCG TTTTCGTCAC CGACGGCCGC GCCCCCACCT TCAGGCATGA ACTTCTGCCC
ACCTACAAGG CCAATCGGCC GCGCATGCCC GAAGGGCTGG CCGCGCAGCT CGAACCGTTG
AAGGCGGGGC TTCGGCTGCT GGGCATCCGC GTGCTCGAGG CCGAGGGCGG GGAAGCCGAC
GACTGCATCG CCTCCCTGGC CGGCCGTTTC AAGGAAGAGC GCAGCGTGGT CATTGTCGGC
GCGGACAAGG ATCTGCGGCA GTGTCTGGAC GAGAACGTGG TCATGTGGGA CCCGGCCCAA
GGCAAGGAGA AGCTTGTCAC CCGCGAGGGC TTTGTGGAGG AGACGGGACT GCAGCCGGAT
CAGTGGGCGG ATTTCCAGGC CATGACCGGA GACGCGGCGG ATAACATTCC CGGCATCCCG
AAAGTCGGGC CCAAGACGGC CATGGGTTTC TTGCGCCGCT TTCCAAGCCT TGATTTGCTC
AAAAAGAATT TCGACCGCCT CACGGCCAAG GAACAGACCC TGCTCTCCCC GCACATGGAG
CAGGTCTTTG TGTACCGGAA ACTGACCACG CTTCGCACGG ACATGTGCAC GGAGTTCGGT
CTTGACGATC TGGCTGTGGG AGAGGTCGAC GGCGGGGCGC TGGATTTTTT CAAGGAATAT
GAATTCCGCT CCCTCTTGTC CGAATTTCAG GCCCTTGCCC GTAAAAACGG GCGCGCCAAG
GCGTCTGGCG CTCAGGAGCA GGCGGCGGTG GCCGCTCCGG TCCCGGACGG GGAGCAAACA
TCCGGTCCGG TGCGGGTCGA ACCCCGCCTG GCCCCACGCC TTGAGCCCAT GGCCGGAAAG
GACGTGGGCC TTTACGCCGA GGGCGAAAAG TGGATTCTGG GCACGGATGC GGAAGAGCTT
TTGTTCATGG GCGCGGCCTC GGATTTGTGC CGCGCGCTGA CTGGGGCGCG CGTGTACGTG
ACGTCGTACA AGAGCGTGCT TGAGCAGGGC CGCCTTGATC TTTCGGGCTG CGCCGAAATT
TTCGACATAG AGCTTGCCGC CTATCTCCTG AGCCCGGAAG AGCGCAATTA CTCCCTGGAG
CGAATCCGCG ACGGGCTGGG CGACGAGATC GACGTGCACC GGGAAAATCA CGGCCAGGCA
GTGCTGGCAG TAGGCCGCCT GCTGCATGCG CGGCTCGCGG GCTCGGAGTT GCTTGGGCTG
CTGCAAGATC TTGAATTGCC TCTGACCGAG GTGCTGGTGC GCATGCAAAA ACGCGGCATC
CGCATTGATG CGGCCAGGTT CCATGATTTT CTCGGCATGG TCCAGGCCGA GCTGGATCGG
TTGACGCGCA CGATTCATGA GCAGGCCGGA GAAGAGTTCA ACATCCGCTC CAGCCAGCAG
CTGGCCGAAG TGCTTTTTTC CCGACTGGGC CTGGCCTGCA AGCAGAAGAC TCCCGGCGGG
GCGCAATCCA CGTCCAGCAG CGTGCTTGAA GGATTGGCCG CGGAGCATCC CATCGTCGCC
GATGTGCTGG AGTTCAGGAT GTACGAGAAG CTGCGCTCCA CGTATCTTGA GCCCATGCCG
CAGCTGGCCG ATAAGAACGG GCGCATCCAC ACCACCTTCA ACCAGCTGGC CACGGCCACT
GGCCGCCTTT CAAGCAGCAA CCCGAACCTG CAGAACATCC CCATTCGCGG AGCGCTTGGT
CCGCGAATGC GCTCCTGTTT CGTGGCCTCG CCCGGCAACC GGCTTGTGGC TGCGGACTAT
TCGCAGATCG AGCTTCGGGT TCTGGCGCAC ATGTCCGGAG ACCAGACCCT CACGGAGGCC
TTTGCCGCCG GTGACGACAT CCACGCCCGC ACGGCCGGGA TTCTCTTCGA CACGACCGAG
GTCAGCGCCG ACGAGCGGCG CAAGGCCAAG ACCATCAACT TTGGCCTGCT CTACGGCATG
GGCCCGCAGA AGCTGGGGCG GGAGCTGGGC ATCAGCCTGA AGGAGGCCAA GGAGTTCATC
GCGGTCTATT TCAGCAAATT GTCCCGCGTG CGGGAGTTTT ACGAGGAAAT CGAAGCCGGG
GCCAAGTCCC TCGGCTATGT GACCACTCTG GCCGGGAGAC GGCGCATGCT GCCCGAGATC
AATTCCCGCA ATACGAACAT GGCCCAGCAG GCCCGGCGTA TGGCCATCAA TACCGTGGTC
CAGGGTTCGG CGGCGGATAT CATCAAAAAG GCCATGCTCG AAGTGGACAA GAGTCCGGTT
ATTGGCGAAT TAGGCGCGAG CCTGATCCTG CAGATTCACG ACGAACTGCT GCTCGAGGCC
CCTGCGGCCC GGGCCCGGGA AGTGGGCGAG GCCGTGGCCG GGATCATGGC TTCCGTGTAC
AGCCTCAGCG TGCCCCTCGT GGTTGACTGG GGCGTTGGCG ATGACTGGAG CGCGGCTCAC
CAATAA
|
|---|
| Protein sequence | MSLQTRLGLK TEPLFLIDGH AFIYRGFYAY PDFKRSDGFP TSAMYIVFKL VLRLLREENP
SHLVFVTDGR APTFRHELLP TYKANRPRMP EGLAAQLEPL KAGLRLLGIR VLEAEGGEAD
DCIASLAGRF KEERSVVIVG ADKDLRQCLD ENVVMWDPAQ GKEKLVTREG FVEETGLQPD
QWADFQAMTG DAADNIPGIP KVGPKTAMGF LRRFPSLDLL KKNFDRLTAK EQTLLSPHME
QVFVYRKLTT LRTDMCTEFG LDDLAVGEVD GGALDFFKEY EFRSLLSEFQ ALARKNGRAK
ASGAQEQAAV AAPVPDGEQT SGPVRVEPRL APRLEPMAGK DVGLYAEGEK WILGTDAEEL
LFMGAASDLC RALTGARVYV TSYKSVLEQG RLDLSGCAEI FDIELAAYLL SPEERNYSLE
RIRDGLGDEI DVHRENHGQA VLAVGRLLHA RLAGSELLGL LQDLELPLTE VLVRMQKRGI
RIDAARFHDF LGMVQAELDR LTRTIHEQAG EEFNIRSSQQ LAEVLFSRLG LACKQKTPGG
AQSTSSSVLE GLAAEHPIVA DVLEFRMYEK LRSTYLEPMP QLADKNGRIH TTFNQLATAT
GRLSSSNPNL QNIPIRGALG PRMRSCFVAS PGNRLVAADY SQIELRVLAH MSGDQTLTEA
FAAGDDIHAR TAGILFDTTE VSADERRKAK TINFGLLYGM GPQKLGRELG ISLKEAKEFI
AVYFSKLSRV REFYEEIEAG AKSLGYVTTL AGRRRMLPEI NSRNTNMAQQ ARRMAINTVV
QGSAADIIKK AMLEVDKSPV IGELGASLIL QIHDELLLEA PAARAREVGE AVAGIMASVY
SLSVPLVVDW GVGDDWSAAH Q
|
|---|
| |