Gene Dbac_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3011 
Symbol 
ID8378706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3403674 
End bp3404654 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID645002246 
ProductPolyprenyl synthetase 
Protein accessionYP_003159502 
Protein GI256830774 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAG CCTTTGCCCA ACTCAAAGCA ACTTTCCTCA AAGAGCTGCC GGCTATCAAT 
GCCGCCATCG CGCAGGAAAT TGACGCTCTG CCCAAACTGG TCAGGCCCGT GGCCGCGCAT
GTCATGGAGG CCGGTGGAAA GCGCCTGCGG CCCATGCTCA CGCTTCTTTT TGCCCGCGCC
CTTTCTTTCC GGGGAGACAA TCTGCAAACC CTGGCCAGCT CCCTGGAATT TCTGCATTCG
GCCACCCTCA TGCACGACGA CATTCTGGAC AACTCGGAAT TGCGCAGGGG CAAACGCGCA
GCGCATACCC TTTTCGGCAT CACTCCCACG GTGCTGGCCG GAGACGTGCT CCTGGCCCTG
GCCAACGAAA TCGTGGCCCG CACAAACAAT CCGGCCCTGA CTTCCTGCAT CTCCAAGGCC
ATCATGCAAA CGGCCACGGG CGAAATCATG GAGATCGCCG CCATCCGCAA AGCGCACATC
ACCCGCGCCG AATACATCGA GATCATCACC GGCAAGACGG CCTACCTTAT CCAGTCGGCC
TGCGAGTTCG GCGTCATCGC GGCAGAAGGC TCCGAACGCG CACGGGCAGG AGCCAAGACC
TTCGGCCTGA ACCTTGGCAT CGCTTTCCAG CTGGTGGACG ACGCCCTGGA CTACACATCG
CGGGCCGACA CCTCGGGCAA GCCCCTGGGC GGCGACCTGC GCGAAGGCAA GTTCACCCTG
CCTCTGCTTT TGTATCTTGA ATCCCTGCCC GAAGACCAAC GCGAAATCGT CACCCGGGAA
CTCACGGATG TAAACCTGCA CCCCGTCAGA CAGGATCAGA TCATCGCCGA TGTCGTGGGG
CAGGGCTTTG CCGAAAAAAC CCGGGATGAA GCCCGATCCT ATTTGGCACT AGCCAGTCAG
GCTCTTGCCG TGCTACCCGA ATGCCTGGAG AAAAAACTGC TCGGAGCCAT GATCGAATTC
GTCCTGACGC GGGATAAGTA G
 
Protein sequence
MNEAFAQLKA TFLKELPAIN AAIAQEIDAL PKLVRPVAAH VMEAGGKRLR PMLTLLFARA 
LSFRGDNLQT LASSLEFLHS ATLMHDDILD NSELRRGKRA AHTLFGITPT VLAGDVLLAL
ANEIVARTNN PALTSCISKA IMQTATGEIM EIAAIRKAHI TRAEYIEIIT GKTAYLIQSA
CEFGVIAAEG SERARAGAKT FGLNLGIAFQ LVDDALDYTS RADTSGKPLG GDLREGKFTL
PLLLYLESLP EDQREIVTRE LTDVNLHPVR QDQIIADVVG QGFAEKTRDE ARSYLALASQ
ALAVLPECLE KKLLGAMIEF VLTRDK