| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2989 |
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| Symbol | |
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| ID | 8378683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3382483 |
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| End bp | 3384393 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645002223 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003159480 |
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| Protein GI | 256830752 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.327814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG ATCGTGATCT GGATACCGGC AACGGTAACG GCGCGGGCAA CGAAGAGGTC
TTCAAGCCCA TTATCCAGCT TTTGATCCGC GAGGGGCATC TGACCATCCA GCAGGCGCAA
TACGCGCGGC GGGTCTCCTC CAAGCTGCAT ATGAGCAAGC CGCTGTGCGA GGTCGTGCGG
GAGCTTGGGT ATGTCACGGA TGAAAACATC CGCCAAACCG TTCGCCGCAA TCAGGGCGAA
CTGCGCATCG GCGACCTGCT GAACGGTTTG GGCTATTTGA CGGACGAGGA GCTCAACCGC
GCCCTGGATT TGCAGCTGCA GGGCGGGCGG CAGCAGAAGC TCGGCGACAT CCTCATCCAG
CATAAATTTC TGGCTGACGA GAAACTGACG GAAATACTGG CCATGCAGCT CGGATTGCCG
ATCCTGGAGC TGACGGCCAA AGAGCCGGAC CCCGGACTGA TGAGCCGTGG TCCCGTGGAG
TATTACGAAC AGTACCGCTT TGTGCCTTTC GACATGCAGC CTGATGGCGC GGTGCGGATC
GCCTTTGTCG ATCCGCTGGA TCCGCGCAGC CTGGATGCGG CGCGGGACTA TTTCGGCAAG
AACATTGTCG TCTGCATTAC GCGGGTCAGT CAGCTCGACG ACGTGCTGAG CAAGCGCAAG
GAAGAGCTGC GCATCGGCAA CGGGGCGGAC TTGAACCGCC TGAACATCGT CGAGATCGCC
AATTCCATCG TGCTGGCCGC GTTCAAGCGC GGGGCCAGCG ACATTCACGT CGAGCCCATG
GCCGACCGGC TGCGGGTCCG TTTTCGCGAA GACGGCGTCA TGGTCCATTT CCGCGATTAT
CCCATCGGCG CGGTGGCTCC GCTGGTCAGC CGTTTCAAGA TCATGTGCGG CGCGGACATC
GCGGAGAAGC GGCGGCATCA GGACGGGCGG CTCATTTTTA ATCACATGGG CGTGCAGATC
GACCTGCGCA TGTCCTTCTA CGTCACGGTG TACGGCGAAC AGATCGTCAT GCGCCTGCTG
AAGAATCAGG AAGAGCTGTT GCCCATGCAC GAGCTGGGAA TGCTTCCGGG CATGCTCAGC
CGGTTCATGG ACGAGGCCCT GGACGCGCCG TCCGGGGTCA TCATGGTCAC CGGGCCCACA
GGTTCCGGCA AGTCGACCAC GGTGTACAGC TGCATCAATT ATCTGAACCG GCCAGAAGTG
AGCATCATCA CGGCCGAGGA TCCGGTGGAA TACAAGGTGC GCGGGATTGG GCAATGCTCC
ATCATGCCCT CCATTGGCCT GACCTTCGAG GAGACGCTGA AGCACATCGT CCGCCAGGAT
CCGGATATTG TGGTCATCGG CGAGGTGCGC GACCATTTTT CGGCGGAGAT GTGCATTCAG
ACCGCCTTGA CCGGACATAA GGTGCTGACG ACCTTTCACA CCGAGGACAG CATCGGCGCC
CTGGTTCGCC TGCTGGATAT GGACATCGAG CCGTTTCTGG TTTCCTCGAC CCTGTCCTGC
ATTCTCTCGC AGCGACTGGT GCGACGGGTC TGCCCGCATT GCGCGGTTCC CTATCAGCCC
GACCTGAGTC AGCTTCGGCG GATGGGCTGC ACCTACGGCG ATCTGGCCGG CGCCGAGTTC
CGCAAGGGGC GGGGGTGTGC GGCCTGCAGG CACAGCGGGT ACAAGGGCCG TCTGGCCGTG
TATGAGATGC TCATTCCGGA AGTCTTTATT CGGGATGCGG TGTTGCAGCG CAAGACGACT
CATGAGCTGC GCGTGATCAG CGTGGAGAAG GCCGGCATGA TTTCCCTGAT GGAAGACGGG
ATCACCAAGG CGGCGATTGG AATGACCACG GTGGAAGAGG TCTTGAGGAC CTTGCCTCGG
GTCCAGAAAC CCCGGCCTCT GGCCGATTTG CGACGGATAC TCGGAGTCTA G
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| Protein sequence | MSQDRDLDTG NGNGAGNEEV FKPIIQLLIR EGHLTIQQAQ YARRVSSKLH MSKPLCEVVR
ELGYVTDENI RQTVRRNQGE LRIGDLLNGL GYLTDEELNR ALDLQLQGGR QQKLGDILIQ
HKFLADEKLT EILAMQLGLP ILELTAKEPD PGLMSRGPVE YYEQYRFVPF DMQPDGAVRI
AFVDPLDPRS LDAARDYFGK NIVVCITRVS QLDDVLSKRK EELRIGNGAD LNRLNIVEIA
NSIVLAAFKR GASDIHVEPM ADRLRVRFRE DGVMVHFRDY PIGAVAPLVS RFKIMCGADI
AEKRRHQDGR LIFNHMGVQI DLRMSFYVTV YGEQIVMRLL KNQEELLPMH ELGMLPGMLS
RFMDEALDAP SGVIMVTGPT GSGKSTTVYS CINYLNRPEV SIITAEDPVE YKVRGIGQCS
IMPSIGLTFE ETLKHIVRQD PDIVVIGEVR DHFSAEMCIQ TALTGHKVLT TFHTEDSIGA
LVRLLDMDIE PFLVSSTLSC ILSQRLVRRV CPHCAVPYQP DLSQLRRMGC TYGDLAGAEF
RKGRGCAACR HSGYKGRLAV YEMLIPEVFI RDAVLQRKTT HELRVISVEK AGMISLMEDG
ITKAAIGMTT VEEVLRTLPR VQKPRPLADL RRILGV
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