Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2914 |
Symbol | |
ID | 8378607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3296994 |
End bp | 3298946 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645002147 |
Product | alpha amylase catalytic region |
Protein accession | YP_003159405 |
Protein GI | 256830677 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGAAC AAGCTTCCCA TGCCCTGTTG AACGAAATCC TGGCGGGCCT CAGACCCGAA ATCGGCAAGT TCCGGCTGCG CCATTTCTAT ACGCGTCTGG GCGCCAACTT TTACGCCATC TATTCCCTTT TCAAACTGCT CTATGGAGAC CGGCCCGACT TCAAGCAGCA GATGGTGCGA CTGGTCGAAA CCCTCGCCCT GCGCTATATG GAGCGTACTC CCACCTTGCG GAAATCGGAC TTGGCGCGTG AAGTAAACTA CAACTGGTTT TTAAGCCAGA AATGGGTGGC CATGGCGCTG TACTGCGATC GCTTCGCGGA CAACCTGCAG GGCCTGCGCG AAAAACTCCC CTACTTCCAG GAACTGGGCG TCAACATGCT GCACGTCATG CCCATCCTCG ACTGCCCGCC GGAAAACAAC GACGGCGGCT ACGCGGTACG GGACTTCCGC AAGATCGACA CCAGATACGG CACCCTCAAG GACGTCGAAG AGCTGGCGGC CACGCTCAAG AGCCGCGAAA CCCTCCTCGT CCTCGACGTC GTGGTCAACC ACACCTCTGA CGAACACGAA TGGGCAATGC GGGCGCGGCA GGGCGAAAAG AAATACCAAG ACTACTACTA CGTCTTCGAC GACCGCAAAA CACCCGATGC CTACGAAGAG GGCATGCCCG AAATCTTCCC GGTCACCGCG CCCGGCAACT TCACCTGGGA CGAGACCATG GGCAAGTGGG TCATGACGGT TTTCAACACG TATCAATGGG ATTTGAACTA TCGCAACCCG GCAGTGCTGA TTGAGATGCT CGACATCATC CTCTTCTGGG CCAACAAAGG CGCGGACATC CTGCGCCTCG ACGCCGTGGC CTTCCTGTGG AAGAAGATCG GCAGCACCTG CCAGAACGAG CGCGAGGCCC ACCTGCTGCT GCGCCTCATG AAGGACTGCT GCCAGGTGAC GGCGCCAGGC GTGCTGTTCA TCGCCGAGGC CATTGTCGCG CCGGGCGAGA TCGCCAAATA TTTCGGGGAA GACGCGATCT ACTCCAAGGA ATGCGAGATC GCCTATAACG CCTCGCTCAT GGCCCTGCTC TGGGACGCCG TGGCCACCAA GAACGCAAAC CTACTCAACC TGGGCGTGAA GAACCTGCCG AACAAACTGG ATCGGGCGAC CTGGCTCAAC TACGTGCGCT GCCATGACGA CATAGGGCTT GGCTTCGACG ACAGCGACGT GGAACTGGCG GGATACGACC CGACCCTGCA CCGAGCCTTT CTGGTCGATT ATTTCACGGG CAAATTCCCT TCGTCGCCGG CCCGGGGCAT GCCGTTCGGG ACGAACCTGA AAACCGGCGA CGCGCGCATC TCCGGCTCCC TGGCTTCCCT GGTCGGCCTG GAGTCGGCGC TGGACTCCGA GGACGAGGAG GCCATAAACG CCGCCATCAA GACCATCACG CTGCTGCACA GCATCATCCT CTCCTTCGGC GGCCTGCCGC TCATGTACTA CGGAGACGCC ATAGGTACGC TGAACAATCT GGAATTTCTC TCCGATCCGG CAACGCAGAA TGACTCACGC TGGGTGCACA GGTCTCGTTT CGACTGGGAA AAAGCCGAAA AGCGCCATCA AAGCGGCACC GTCGAACAGC GTATTTTCTC CGCGCTTAAA AAATTGATCG CCCTGCGCAA GGAGCTTCCG GCCTTCGTGG ATTTCGACAA TCGTCATCTG CTGCTCGTCG AAAACCCGAA CCTGCTGGTC TTTTACCGCA CGGACCCGGA AAACAGCCGC AGCCGGGTGC TCGTCATCTG CAACTTCAAC GTCGAACCGC AAGCGCTTCC CATCGATACG CTCACGCCGC ACGGATTCTT CAACCACGAC GGCATGAAGG ATCTCTGTAC AGGTGAAAAC GTGCCGGTGG AAGACGGACA GATCTTTATA CCGGCTCTGT CCTTCTACTG GCTCAGGGAT TGA
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Protein sequence | MYEQASHALL NEILAGLRPE IGKFRLRHFY TRLGANFYAI YSLFKLLYGD RPDFKQQMVR LVETLALRYM ERTPTLRKSD LAREVNYNWF LSQKWVAMAL YCDRFADNLQ GLREKLPYFQ ELGVNMLHVM PILDCPPENN DGGYAVRDFR KIDTRYGTLK DVEELAATLK SRETLLVLDV VVNHTSDEHE WAMRARQGEK KYQDYYYVFD DRKTPDAYEE GMPEIFPVTA PGNFTWDETM GKWVMTVFNT YQWDLNYRNP AVLIEMLDII LFWANKGADI LRLDAVAFLW KKIGSTCQNE REAHLLLRLM KDCCQVTAPG VLFIAEAIVA PGEIAKYFGE DAIYSKECEI AYNASLMALL WDAVATKNAN LLNLGVKNLP NKLDRATWLN YVRCHDDIGL GFDDSDVELA GYDPTLHRAF LVDYFTGKFP SSPARGMPFG TNLKTGDARI SGSLASLVGL ESALDSEDEE AINAAIKTIT LLHSIILSFG GLPLMYYGDA IGTLNNLEFL SDPATQNDSR WVHRSRFDWE KAEKRHQSGT VEQRIFSALK KLIALRKELP AFVDFDNRHL LLVENPNLLV FYRTDPENSR SRVLVICNFN VEPQALPIDT LTPHGFFNHD GMKDLCTGEN VPVEDGQIFI PALSFYWLRD
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