Gene Dbac_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2914 
Symbol 
ID8378607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3296994 
End bp3298946 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content59% 
IMG OID645002147 
Productalpha amylase catalytic region 
Protein accessionYP_003159405 
Protein GI256830677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAC AAGCTTCCCA TGCCCTGTTG AACGAAATCC TGGCGGGCCT CAGACCCGAA 
ATCGGCAAGT TCCGGCTGCG CCATTTCTAT ACGCGTCTGG GCGCCAACTT TTACGCCATC
TATTCCCTTT TCAAACTGCT CTATGGAGAC CGGCCCGACT TCAAGCAGCA GATGGTGCGA
CTGGTCGAAA CCCTCGCCCT GCGCTATATG GAGCGTACTC CCACCTTGCG GAAATCGGAC
TTGGCGCGTG AAGTAAACTA CAACTGGTTT TTAAGCCAGA AATGGGTGGC CATGGCGCTG
TACTGCGATC GCTTCGCGGA CAACCTGCAG GGCCTGCGCG AAAAACTCCC CTACTTCCAG
GAACTGGGCG TCAACATGCT GCACGTCATG CCCATCCTCG ACTGCCCGCC GGAAAACAAC
GACGGCGGCT ACGCGGTACG GGACTTCCGC AAGATCGACA CCAGATACGG CACCCTCAAG
GACGTCGAAG AGCTGGCGGC CACGCTCAAG AGCCGCGAAA CCCTCCTCGT CCTCGACGTC
GTGGTCAACC ACACCTCTGA CGAACACGAA TGGGCAATGC GGGCGCGGCA GGGCGAAAAG
AAATACCAAG ACTACTACTA CGTCTTCGAC GACCGCAAAA CACCCGATGC CTACGAAGAG
GGCATGCCCG AAATCTTCCC GGTCACCGCG CCCGGCAACT TCACCTGGGA CGAGACCATG
GGCAAGTGGG TCATGACGGT TTTCAACACG TATCAATGGG ATTTGAACTA TCGCAACCCG
GCAGTGCTGA TTGAGATGCT CGACATCATC CTCTTCTGGG CCAACAAAGG CGCGGACATC
CTGCGCCTCG ACGCCGTGGC CTTCCTGTGG AAGAAGATCG GCAGCACCTG CCAGAACGAG
CGCGAGGCCC ACCTGCTGCT GCGCCTCATG AAGGACTGCT GCCAGGTGAC GGCGCCAGGC
GTGCTGTTCA TCGCCGAGGC CATTGTCGCG CCGGGCGAGA TCGCCAAATA TTTCGGGGAA
GACGCGATCT ACTCCAAGGA ATGCGAGATC GCCTATAACG CCTCGCTCAT GGCCCTGCTC
TGGGACGCCG TGGCCACCAA GAACGCAAAC CTACTCAACC TGGGCGTGAA GAACCTGCCG
AACAAACTGG ATCGGGCGAC CTGGCTCAAC TACGTGCGCT GCCATGACGA CATAGGGCTT
GGCTTCGACG ACAGCGACGT GGAACTGGCG GGATACGACC CGACCCTGCA CCGAGCCTTT
CTGGTCGATT ATTTCACGGG CAAATTCCCT TCGTCGCCGG CCCGGGGCAT GCCGTTCGGG
ACGAACCTGA AAACCGGCGA CGCGCGCATC TCCGGCTCCC TGGCTTCCCT GGTCGGCCTG
GAGTCGGCGC TGGACTCCGA GGACGAGGAG GCCATAAACG CCGCCATCAA GACCATCACG
CTGCTGCACA GCATCATCCT CTCCTTCGGC GGCCTGCCGC TCATGTACTA CGGAGACGCC
ATAGGTACGC TGAACAATCT GGAATTTCTC TCCGATCCGG CAACGCAGAA TGACTCACGC
TGGGTGCACA GGTCTCGTTT CGACTGGGAA AAAGCCGAAA AGCGCCATCA AAGCGGCACC
GTCGAACAGC GTATTTTCTC CGCGCTTAAA AAATTGATCG CCCTGCGCAA GGAGCTTCCG
GCCTTCGTGG ATTTCGACAA TCGTCATCTG CTGCTCGTCG AAAACCCGAA CCTGCTGGTC
TTTTACCGCA CGGACCCGGA AAACAGCCGC AGCCGGGTGC TCGTCATCTG CAACTTCAAC
GTCGAACCGC AAGCGCTTCC CATCGATACG CTCACGCCGC ACGGATTCTT CAACCACGAC
GGCATGAAGG ATCTCTGTAC AGGTGAAAAC GTGCCGGTGG AAGACGGACA GATCTTTATA
CCGGCTCTGT CCTTCTACTG GCTCAGGGAT TGA
 
Protein sequence
MYEQASHALL NEILAGLRPE IGKFRLRHFY TRLGANFYAI YSLFKLLYGD RPDFKQQMVR 
LVETLALRYM ERTPTLRKSD LAREVNYNWF LSQKWVAMAL YCDRFADNLQ GLREKLPYFQ
ELGVNMLHVM PILDCPPENN DGGYAVRDFR KIDTRYGTLK DVEELAATLK SRETLLVLDV
VVNHTSDEHE WAMRARQGEK KYQDYYYVFD DRKTPDAYEE GMPEIFPVTA PGNFTWDETM
GKWVMTVFNT YQWDLNYRNP AVLIEMLDII LFWANKGADI LRLDAVAFLW KKIGSTCQNE
REAHLLLRLM KDCCQVTAPG VLFIAEAIVA PGEIAKYFGE DAIYSKECEI AYNASLMALL
WDAVATKNAN LLNLGVKNLP NKLDRATWLN YVRCHDDIGL GFDDSDVELA GYDPTLHRAF
LVDYFTGKFP SSPARGMPFG TNLKTGDARI SGSLASLVGL ESALDSEDEE AINAAIKTIT
LLHSIILSFG GLPLMYYGDA IGTLNNLEFL SDPATQNDSR WVHRSRFDWE KAEKRHQSGT
VEQRIFSALK KLIALRKELP AFVDFDNRHL LLVENPNLLV FYRTDPENSR SRVLVICNFN
VEPQALPIDT LTPHGFFNHD GMKDLCTGEN VPVEDGQIFI PALSFYWLRD