| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2879 |
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| Symbol | |
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| ID | 8378571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 3262546 |
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| End bp | 3263433 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645002111 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003159370 |
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| Protein GI | 256830642 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.474415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGACA TCCTGCCCAC CCTGGCCCTG GCCACCCCGA AACACAGCCC GGACAAGGCC
ACCGTCCGCG CCTGGTCCCT GGTCCTGACC AGCCGCAGAT TCCTGAACCG CTCCGATCAC
GGCAGACTTC TGGTCGCGCC GGCCCTGGCA GCGCTCGCCG TGCAGGAGAT CCTCGCCTAC
GAACAGGAAA ATCTGCCGCG GCCCCGCCCG GCGCCCCTGC CGGACAACTC CTGGGTCAGC
CTGCTGATCA TCGCCGTCTT TCTGGGCCTG ACCATGTGGC TCGACGCCCA GGGCCTGGGG
AGACGCATCT CCTGGCATCT CGCCGGCCGG GCCGACGCCG GACTCATCCT TGGCGGGGAG
TGGTGGCGCT GCGTGACCGC CCTTTTCCTG CACGCCGACG CCGGACATCT GCTGGCCAAC
GCAGGCGCCC TGGCGGTGCT GGCCTCGCTT CTGGCGCGAC GCATCGGATC AGGCCTGACC
TGGGGGCTTT TCGTTTTCTC CGGAGCTCTC GGCAACGCCC TCAACGCCTG GGCGCAGGCC
CCCGATCACC TCAGCGTGGG CGCATCCACG GGAGTCTTCG GACTGATCGG CGTCCTGGCC
GGCGGCGCGG GACGGGCCGA ACGCGGCTCA AGAGGACAGG TTTTACTGCT GGCCCTGGGC
TTCGGTTTCA GCCTGCTGGC CATGCTCGGC GCGGGCGAGG AGCGCGTGGA CCTGGGCGCT
CATTTTTTCG GGATGTGCTG CGGCGTGCCC TTCGGGTTGC TGGTCGGCGG TTGGCACGGG
GCGACGGGAT GGAAGGCCCG GATTGGAGCT TTGGCCGGCG CGGCCGGGCT GGTCCTTGTG
GTCTGGGCCT GGATAGTGGC CCTTGAAAGC GGCATGCCGG GAGGATGA
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| Protein sequence | MIDILPTLAL ATPKHSPDKA TVRAWSLVLT SRRFLNRSDH GRLLVAPALA ALAVQEILAY
EQENLPRPRP APLPDNSWVS LLIIAVFLGL TMWLDAQGLG RRISWHLAGR ADAGLILGGE
WWRCVTALFL HADAGHLLAN AGALAVLASL LARRIGSGLT WGLFVFSGAL GNALNAWAQA
PDHLSVGAST GVFGLIGVLA GGAGRAERGS RGQVLLLALG FGFSLLAMLG AGEERVDLGA
HFFGMCCGVP FGLLVGGWHG ATGWKARIGA LAGAAGLVLV VWAWIVALES GMPGG
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