Gene Dbac_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2811 
Symbol 
ID8378502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3188766 
End bp3189545 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID645002043 
ProductPrephenate dehydrogenase 
Protein accessionYP_003159303 
Protein GI256830575 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTA GCCCCGCATC GGCCATCGTG GTCATCGGCG CCAAAGGGCA GATGGGGGCG 
CGCTTCGTAC GCAGCTTTCG CGAAGCGGGC AACCCCGTGA CCGAGTTCGA CCATCCCCTG
GATCTGGCCA GGCTGCCCGG CGCCGTGCGG GGGGCCGCCC TTGTCCTCTT GTGCGTACCC
ATCACGGCGA TGAAGGATGT CGTCGCCTTG GTGGCCCCGC ATCTCACGCA GACGACCATC
CTGGCCGACA TCTGCTCGGT CAAGGTCCAG CCCCTGCGTG ACATGCTGTC CCAGACCACA
ACGCCCGTGG TCGGCACCCA TCCACTTTTC GGCCCCGAAA CGCTTGACGT GGAGCTACGA
ATTGCCGTAA CTCCGGGACG TGACCAGGAA GCGACCGATA ATCTATCAAG CTGCTTCCGC
GATCTGGGAT TTTCCCCGTT CACCACAACG GCCGATGAGC ATGACAAAGC CATGGCCTAC
ATCCAAGGAC TCAACTTCGT GACAACCGTC GCTTACCTCT GTGCTTCCCC TCTGGAAAAC
GGAATCGAGC GTTTCTTCAC GCCCTCGTTC GGACGACGCG TGGAGGCGGC CACGAAAATG
ATCACCCAGG ACGCCCCCCT CTTCTCCACC ATGTTCGAAG CGAACCCCCA CAGCCTTGAA
GCCGTGCGCG CGTTTCGTTC ATACCTGAAC GTCGCCGCCG GCGGCGATCT GGAACTTTTG
AGCCAGAAGG CTCTTTGGTG GTGGCGCAAG CAGCATGACG CAGGGGGACC CGCTTCCTGA
 
Protein sequence
MSLSPASAIV VIGAKGQMGA RFVRSFREAG NPVTEFDHPL DLARLPGAVR GAALVLLCVP 
ITAMKDVVAL VAPHLTQTTI LADICSVKVQ PLRDMLSQTT TPVVGTHPLF GPETLDVELR
IAVTPGRDQE ATDNLSSCFR DLGFSPFTTT ADEHDKAMAY IQGLNFVTTV AYLCASPLEN
GIERFFTPSF GRRVEAATKM ITQDAPLFST MFEANPHSLE AVRAFRSYLN VAAGGDLELL
SQKALWWWRK QHDAGGPAS