| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2728 |
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| Symbol | |
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| ID | 8378412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 3119093 |
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| End bp | 3120736 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645001953 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003159220 |
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| Protein GI | 256830492 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACATTTG ATATACGTGG AGTTCTGCTC CTTATCATGC TGGTCTTGGC TGGGTGTATG
CCCGCCAAGA AGGCTCAGGG CCCGTCGGAC CTTGGAGCCC CTAGCGCGGC GAGTCGGAAC
GCCGGAACTG AACTGACGCA GGATGCGTCG GTCGCGTCCG GGTACGACGC CCCGGAGGCC
TACGGCCCGG ACGAGGATGT CGACCCGCTT GATGTCCTGC AGGATGGAGA TGACCTCCCC
GATGCGGAGT CCTTGTCTCC CGAGGAACAA AAAATCCTCG ATACGCAGAT ATCCTTCCAT
GTCGGTCTGG ATACCGAGGA AAACGCGGAT GTCCAGCGCT ATTTTCAGTA CTACACCCAT
GGCCACCGTG GCACCATGGA GGGCTGGCTC AAGCGGGCCC AGCGCTATCT GCCGCATATC
CGGGAGCGAT TTCTGGCCGA GGGGCTGCCC GAGGACCTGA TCTATCTGCC CTTCGCCGAG
AGCGGTTTCA ACCCCTTTGC CCAATCCCGT TCCGGTGCCT GCGGTGTGTG GCAATTCATG
CCCCGGACCG CTCTCAATTA CGGATTGACC GTGGACAAAT GGGTGGACGA GCGTCGCGAT
CCCCACAAGT CCACCGAGGC CGCCATTGCC TATCTGAAAA AATTGTATGC GGATTTTGGT
GATTGGTCCT TGGCTCTGGC CGCCTACAAT GCAGGCGAGG GCACCATTGG ACGCGCCTTG
AAAAAGACGG GCACGGAGGA TTTTTTCAGT CTTTGCGAGG CTTCCGAGGA TTTGAAAAAG
GAAACCAAAC TGTACGTCCC CAAGTTCCTG GCCCTGGTCA AGGTGGCCCG GAACCTGGAG
AAGCTCGGTT TTGAACCTCT TGATCTGGAG AAGCGCCCCA TCGCACCCGT CCAGCTGAAA
GCCAAGCCTG GAACGGACCT GCTGGCTTTG GCCCAGAGCC TGGGCATGGA CTGGAAGTCC
TTCCGGGAGC TGAACCCTTC TTTTCGCAAG CAGGAAGCTC CTCCCGCGCG CTCCGTCAAG
GTCGCCGTCC CCGGTCAGCT GGTGGCCAAG GCCGAAGATT TCCTGAAGCG TCCCGTAGTT
CAAAGACAGA CCCAGTACGC ATCCCACAGG GTCAAGCCCG GAGACACCTG GTGGGGGATT
TCCAAAGAGT ATAAAGTTTC GGTGGCGGAC TTGCAGAAAG CCAACAACGG CAGCAGAACC
AAGACCTTAA GGGTTGGGCA ATCGCTGCGC ATACCCGGTC GGGGTTTGGC GTCCGAGTCG
GGCTCAGTGG CGGATGCCAG GAAATGGGCC TCCAAGAGAG CCAATTATCT GGTCCGTCAG
GGCGACACGC TCTGGTCCAT TGCCAAGCAG TTCAAGACCG ACCCGTCTTC ATTGCTTAAA
GCCAATGGCC TTAAGAGTTC CTCGGTGCTG AAGATCGGCC AGAAGCTCTA TGTGCCCGAT
GCGGGCAGCG CCGATGTTAA GGTCGCCAAG GCCCATGCCG ATGCCGTGCG CAGGGAGCTG
GTCAACTACA AGGTTCGCCC GGGGGATAGC CTGTGGGGCA TTGCCAAGCG CTTTGGAGTG
ACCCCCTCCG AGTTGCTGTC CTGGAACAAT CTGGCCAAGA ACGGCCATAT CCGCCCGGGA
GACCAGCTCA AGGTCTACCG CTGA
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| Protein sequence | MTFDIRGVLL LIMLVLAGCM PAKKAQGPSD LGAPSAASRN AGTELTQDAS VASGYDAPEA
YGPDEDVDPL DVLQDGDDLP DAESLSPEEQ KILDTQISFH VGLDTEENAD VQRYFQYYTH
GHRGTMEGWL KRAQRYLPHI RERFLAEGLP EDLIYLPFAE SGFNPFAQSR SGACGVWQFM
PRTALNYGLT VDKWVDERRD PHKSTEAAIA YLKKLYADFG DWSLALAAYN AGEGTIGRAL
KKTGTEDFFS LCEASEDLKK ETKLYVPKFL ALVKVARNLE KLGFEPLDLE KRPIAPVQLK
AKPGTDLLAL AQSLGMDWKS FRELNPSFRK QEAPPARSVK VAVPGQLVAK AEDFLKRPVV
QRQTQYASHR VKPGDTWWGI SKEYKVSVAD LQKANNGSRT KTLRVGQSLR IPGRGLASES
GSVADARKWA SKRANYLVRQ GDTLWSIAKQ FKTDPSSLLK ANGLKSSSVL KIGQKLYVPD
AGSADVKVAK AHADAVRREL VNYKVRPGDS LWGIAKRFGV TPSELLSWNN LAKNGHIRPG
DQLKVYR
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