| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2520 |
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| Symbol | |
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| ID | 8378198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2883546 |
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| End bp | 2884718 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645001742 |
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| Product | TraB family protein |
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| Protein accession | YP_003159015 |
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| Protein GI | 256830287 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.412665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTTTG AAAATTTGCC TGAAAGCGTG ACCGTGGTCG AAGAGGGCGA GAAAAGGTTT
TTTCTCGTCG GAACCGCCCA CGTTTCTCTG GAAAGTGTCG AGGATGTGCG CCGGACCGTG
GAAATCGTGC GTCCCGATTC CATCTGCGTC GAGCTTTGCC CTGCCCGCCA TCAGGCCATG
ACCCGCCGTG ACGACTGGAA GCGGATGGAC ATCTACAAGG TCATAAAAGA AGGCAAGGCG
GTCTTTCTCA TGGTGCAACT CGTGTTGCAA GCCTTTTACC GCAAGATCGG CGACAAGCTG
GGCGTGCAAC CCGGCGCCGA GATGATGGAA GGCGTGCGGC TGGCCGGCGA GACCGGCGCC
ACCCTGGTCC TGGCCGATCG CGATGTGCAG GTGACCTTGA AGCGCGTCTG GGGCTACCTT
GGCTTCTGGA AGAAGTTGCA GCTCATGAGC CAGCTTCTGA CAAGCATCTT TGTCGACGAT
GACGTGGACA AGGCGCTCAT CGAGGACCTG AAGAAAAAAG ACCAGCTGGC CGCCATCATG
GGTTCTTTTG CGGAAAACTT CCCCCAGATA AAAGAGCGCC TTATCGACGA GCGCGACATC
TACCTGGCGC AGAAGATCCG CAAGGCTCCG GGCACGAACA TCGTGGCCGT GGTCGGGGCC
GGGCACGTGC CGGGCATGCA GAAATACTTC GGACAGGAGA TCGATCTGGC CCCGCTGGAA
GAGCTTCCTC CGCCCTCCAG ATGGGGTGCC TTCTGGAAGT GGGGATTGCC CGGTTTTTTC
GTCGCATTGC TGGTCATCGG TTTTTTCCGC GGCGGCGCTG ACGCCTCCAT GGACGCCCTC
TCCATCTGGG TGCTGGTGAC CGGCATCGGA GCCGCCCTGG GCTCACTGGC CGCCTTCGGA
CATCCGCTGA CCGTGCTCTC AAGCTTTCTG GCCGCGCCCA TCACCACGCT GCATCCGCTT
ATCGCCGCAG GCTGGGTGGC CGGGCTTGTC CAGGCCTGGG TCAAGAAGCC CACGGTCTCG
GACCTGGAAG AGCTGCCCAT GAGCGTCATG ACGGTCAAGG GGTTCTGGAT CAATCCGGTC
AGCCGCATCC TGCTGGTGGT CATCTTCGCC AACCTGGGCG CGACCATCGG CGTCTTTGTC
TCCGGAAGCT GGATCGCGAG CCGGGTGTTC TAG
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| Protein sequence | MDFENLPESV TVVEEGEKRF FLVGTAHVSL ESVEDVRRTV EIVRPDSICV ELCPARHQAM
TRRDDWKRMD IYKVIKEGKA VFLMVQLVLQ AFYRKIGDKL GVQPGAEMME GVRLAGETGA
TLVLADRDVQ VTLKRVWGYL GFWKKLQLMS QLLTSIFVDD DVDKALIEDL KKKDQLAAIM
GSFAENFPQI KERLIDERDI YLAQKIRKAP GTNIVAVVGA GHVPGMQKYF GQEIDLAPLE
ELPPPSRWGA FWKWGLPGFF VALLVIGFFR GGADASMDAL SIWVLVTGIG AALGSLAAFG
HPLTVLSSFL AAPITTLHPL IAAGWVAGLV QAWVKKPTVS DLEELPMSVM TVKGFWINPV
SRILLVVIFA NLGATIGVFV SGSWIASRVF
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