Gene Dbac_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2395 
Symbol 
ID8378072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2750676 
End bp2751341 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID645001616 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003158890 
Protein GI256830162 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAT TCATTCTCTC TCCGTCCCTT TTGTCCTCGG ATTTTGGCAA TCTGCGCGCC 
GAACTGACCG CCCTGGAAGA CGCGGGCCTC AAATGGGTGC ACTGGGACGT CATGGACGGA 
GCCTTCGTGC CCAATATCAC CTTCGGCCCC CCGATCATCG GCCGGTTGCG CAAGACCTCG 
AAGCTGTTCT TTGACGTGCA TCTGATGATC GAACGGCCCG AACGCTACAT CCGCGAATTC 
GCCGATGCCG GCGCGGACCT CCTGTGCATC CACGCCGAGA GCACGCTCCA TCTGGAGCGC 
ACGATCAGCG CCATCCGCGA GGCGGGCATG AAAACCGGCC TTGCCCTCAA CCCGGCAACG 
CCCCTAGCCA TCGTCGACTA CCTGCTCCCC AGTCTGGACA TGGTGCTGAT CATGAGCGTC 
AACCCCGGCT TCGGCGGGCA ATCCTTCATC CCCTTTTGCA AGGACAAGAT CGCGGCCCTG 
TCCGGCATGA TCCGCGCGCG TGGCCTTGAG ACCCTCATCC AGGTCGATGG CGGCGTGACT 
CTGGACAACG CGAAAGAACT CTTTGACCTC GGAGCCGACG TACTGGTCTC GGGCTCGGCT 
TTCTTCGGAT TTCCCCCGTA TGCCGAGCGG CACAAGGCTT TTCAGGATGC CATGCGCGCG 
AAATAG
 
Protein sequence
MREFILSPSL LSSDFGNLRA ELTALEDAGL KWVHWDVMDG AFVPNITFGP PIIGRLRKTS 
KLFFDVHLMI ERPERYIREF ADAGADLLCI HAESTLHLER TISAIREAGM KTGLALNPAT 
PLAIVDYLLP SLDMVLIMSV NPGFGGQSFI PFCKDKIAAL SGMIRARGLE TLIQVDGGVT 
LDNAKELFDL GADVLVSGSA FFGFPPYAER HKAFQDAMRA K