Gene Dbac_2386 details

Gene Information

• Locus tag: Dbac_2386
• ID: 8378063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 2740974
• End bp: 2743034
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 645001607
• Product: flagellar hook-associated 2 domain protein
• Protein accession: YP_003158881
• Protein GI: 256830153
• COG category: [N] Cell motility
• COG ID: [COG1345] Flagellar capping protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATG ACCTGACCAC TTCGCTTGCT TCCGGATCCA TCCGTTTCAC GGGCCTCGGC 
TCCGGGACGG ACTTCGACTC GATGATCACC AAACTCATCG AGATCGAGCA AGTCAGGACC 
AAACGGCTCG AGAGTTGGCG GTCTGATTGG GAAGCCAAGA GCGACGCCTT TGACTCGCTC 
TCTTCGAACA TGCTCTCCCT CAAGACGTCC CTGGACTCCA TGAACACCAC GGACGAATTT 
CTGACCAAGA ACGCGGTCTC TTCCAACACC ACCGCCCTAA CCGCCACGGC AGGCAGCACC 
GCGGAAGAAA GTACCCACCA AGTGGATGTG CTTTCCCTGG CGACCAACGA CATGCACATG 
GGGTCGGTAA TTTTTTCCTC CCCGGACAAA ATCATAAGCG ACGGCGCAGC GGGCGCTTTT 
GTCTTCACGG CCGGTTCCCG GCAGGTCACC GTCAACGTCA CCAGCACCAC GACCCTGACC 
CAGTTCGCCA GCCTCATCAA CTCCGACGCG GACAATCGCA ATTATGTACG CGCAAGCGTG 
GTCAACGACG GCAGCGGATA CAGGCTCCAG ATCCGTGGCA TGAACCTGGG CGCGGGCAAT 
GATTTCATCG TCGACAACAG CGCGACCTCG GCCAATCTGC TGACGAATTT CGCACAAGGT 
CAATTCATCG AAACCCAGAA TGCCGGCAAT GCCAGGCTTC GGGTCGATGG CTTCCCTCTT 
GATCCTCCCA CCCCCTCCGA GGATATACTC AAAGCCACCT TCACCGGCAA AACAACCGCG 
GATACTATCA CAACCACCGA TGGAACCTTC AAGCTCGCCT ATGACGGCAC CTTGTATTCC 
GTTGATGTGA CTGCTGCGGA CACCTACGCC TCGCTGGCCG GAAAAATCAA CACCGCAGTC 
GGATTCTCCA TGGCCACGGC CGCAGACGTA TCCGGCAATG TCGAGCTGAC CCTGACGGGC 
GAGGCGGGCT CGGACAAGCA GATTTCCATC ATAAGTTCCC CCGGGACCAC GGTCGGCGCC 
CTGCAACCGG GAGCCTTCGC GCAGATCCAG GGTGCCACCG ACGGCTACTT CGAACGCAGC 
ACCAATTCCA TTTCCGATAT CGTCTCCGGC GTGACCATGA ACCTGGCCAG CATAGGCAGT 
TCGACCATCA CCACCAGCCT CGACCCGCAG GCGGTCACCG CGAAAGTGCA GACCTTTGTC 
GATGCGGTGA ATTCCGTGCT GCAGGAGATC AAGGACCAGA CCCAGGTCAC CACCGTTGGC 
GAAAATGTTT CCGGTTCCCT TTTGACCGGC AACTACGGCA TGCAGATGAT TCAGCAGAAG 
CTCAAAAATA TCCTGGCGGA AAAGGGCGTG GGATTCGACT ATGACATGGA CCCACTGGTC 
TCCCTGGGCA GCGTAGGCAT CACCACGGAC ACCAGCCAGG GCTCCGCGAC CTTCGGCCTG 
CTGGTTTTCG ACTCCGGCGC CTTTACCGCG GCCCTCAAAA CCGACCCCGA CGCCGTGGCC 
CGCCTCTTCA GCGCCGACAA TTATCCTTCG ACCAAGGAAA TGGTGGACGG CGTTGCGGTG 
GAATCCTCGA ACTTCAACTT CGAGTCCTCC ATCAAGGGCA TCACGCAAGC CGGGGAATAC 
TCCGTAAGCT ATACCGTGGG CGCCGGCGGC GACATAACAT CCGCCAGCAT CAACGGATTT 
CCGGCCAGCA TCGACGGCAC AAAGATCGTG GCCACAGGGG ACGGGAACGC GGCGCGAGGC 
CTTTCCCTTG AAGTCATCAA CCTTACGGCG GGCACATATT CCGGTTCGGC CCAGATCAAA 
TCCGGCAAAA CCCAGGAACT GATCGACGAA CTCAAAAGGT TGACGGACTC AACGACCGGA 
ACCCTCGAAG TCTTGAAAGA CAACTATCAG GACATCATGG ATTCCATCGA CGACAAGATC 
GCTTATGAAG AACGCCGCCT GGCTCTCCTG GAGAAGAACC TGCGCCTGCG TTTTGCCAAT 
TTGGAAGCCG TTCTCGGCAC CTACGACAAC ATATCCACAC AACTCAGCTC GCAAATCAGC 
AGTTTGTCCA GCAAGTCATA G 

 

Protein sequence

MADDLTTSLA SGSIRFTGLG SGTDFDSMIT KLIEIEQVRT KRLESWRSDW EAKSDAFDSL 
SSNMLSLKTS LDSMNTTDEF LTKNAVSSNT TALTATAGST AEESTHQVDV LSLATNDMHM 
GSVIFSSPDK IISDGAAGAF VFTAGSRQVT VNVTSTTTLT QFASLINSDA DNRNYVRASV 
VNDGSGYRLQ IRGMNLGAGN DFIVDNSATS ANLLTNFAQG QFIETQNAGN ARLRVDGFPL 
DPPTPSEDIL KATFTGKTTA DTITTTDGTF KLAYDGTLYS VDVTAADTYA SLAGKINTAV 
GFSMATAADV SGNVELTLTG EAGSDKQISI ISSPGTTVGA LQPGAFAQIQ GATDGYFERS 
TNSISDIVSG VTMNLASIGS STITTSLDPQ AVTAKVQTFV DAVNSVLQEI KDQTQVTTVG 
ENVSGSLLTG NYGMQMIQQK LKNILAEKGV GFDYDMDPLV SLGSVGITTD TSQGSATFGL 
LVFDSGAFTA ALKTDPDAVA RLFSADNYPS TKEMVDGVAV ESSNFNFESS IKGITQAGEY 
SVSYTVGAGG DITSASINGF PASIDGTKIV ATGDGNAARG LSLEVINLTA GTYSGSAQIK 
SGKTQELIDE LKRLTDSTTG TLEVLKDNYQ DIMDSIDDKI AYEERRLALL EKNLRLRFAN 
LEAVLGTYDN ISTQLSSQIS SLSSKS