Gene Dbac_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2235 
Symbol 
ID8377909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2576150 
End bp2576929 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID645001456 
Productprotein of unknown function DUF1555 
Protein accessionYP_003158733 
Protein GI256830005 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0504699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAAA AACTAGCAGC GACATGTCTG GCGGCGGCAT TCATCTTTTC AGCAACATTT 
GCTTCCGCAG CTCTGGTGAC ACAGTGGTCG TATGTCAACG ATGCTACTTT TGTCGATTGG
AGCAACGAAG ACGTTAATCA GGATTATATG GTGCTAAGCC CCGACGGCAG AACGTTGTCC
TGGGGAGTGC CATCCGTTTT CTCTAAAACA GGACTGCAAA GTTCGCTTGT GATCGACGGG
CCTGTCGCTG GAAACGATCT GATGACTTCG GGATCCGCTG TAGAGGTAGT GTCAATTACA
CACTTCAATT ACTTGATGAG TTCAGCATTT CCTAATCTTG CGTATGGTAA GGTCGAGGCT
AATGTTGAGT TTACGCCATT TTTGCCTGCG GGACTGCCTC TTCCTGCCGA AACAACTTAT
CTTGAGTTTC TGTTCTTCGA GACTCCAAAC AGTAATGTCG CGACGCCCAT GGATATCTTC
GTTCTCACCG ATCCGGGCGC AACCAGCGGC GCATTTAACT ACGATGGCTA CACATACAAC
TTCTCTTTCT TGAGCGACGG CTTCGGACTC CTCACTGGCG CGTATCATGA TTACATTGTC
AGTCAGCTCG GTGTGGACAC AGACTATTAC GGCTGGCTTG CAAACGAGGA CGGCAGCACG
TCGGCTCAGT TCTACCTGGG TATCTCGGTG GCTCCTGTCC CCGAGCCGGC CACCATGCTT
CTTCTCGGCG CCGGCCTGCT TGGCCTGGGC TTGGCGGCGC GACGCAACAA GAAGAATTGA
 
Protein sequence
MKKKLAATCL AAAFIFSATF ASAALVTQWS YVNDATFVDW SNEDVNQDYM VLSPDGRTLS 
WGVPSVFSKT GLQSSLVIDG PVAGNDLMTS GSAVEVVSIT HFNYLMSSAF PNLAYGKVEA
NVEFTPFLPA GLPLPAETTY LEFLFFETPN SNVATPMDIF VLTDPGATSG AFNYDGYTYN
FSFLSDGFGL LTGAYHDYIV SQLGVDTDYY GWLANEDGST SAQFYLGISV APVPEPATML
LLGAGLLGLG LAARRNKKN