Gene Dbac_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2204 
Symbol 
ID8377878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2537054 
End bp2538262 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID645001425 
Productpolysaccharide deacetylase 
Protein accessionYP_003158702 
Protein GI256829974 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTC CTGGAACCAG TTCCGTCATG TTTCATACCG TGGGCGTGCC TGACAGACGC 
TGGGCCTGGA GTTTCCTCAC GGTTCCGTGG CAGCTCTTCG ACGCCCAGCT TCGCGCGCTG
CGGCGTTTCG GCTATCGGTC GGTTTTCCTG CGCGAGTACA TGGACATCGC CCTGGCCGGG
CGTCTTGGCC AGGAGCGGGT CGTGTCCCTG ACTTTTGACG ACGGGTATCT GGATAATTGG
GTCTATGCTG CGCCGCTGCT CAAAAAACAC GGCTTTTGCG CCACGATTTT CGCTTCAACC
GATTTCGTCG ATCCCGCGAG CGAGCCACGG CCCCAGTTTG ATCCGCTGCG TCCGGACAGC
GCCCGTCTGC CAGGCGCCGG TTTTCTCTCC TGGAGCGAGA TGCGCGCCCT GGAGCAGAGC
GGTGTCATGG AGATTCAGTC CCACGGGATC ACGCACACCT GGTATCCTTG CGGGCCCGGG
ATCGTGGATT TTCGTCACCC GGGCGATACG CACTACTGGA TGGACTGGAA CGCTTCGCCC
GCAGACAAGT GGCGCTATCT GGATTTCAAA TCCGATCCGG GCGTCTGGGG CGAGCCGGTG
TATGAACACG CCAAATCCAT GGATGGCCCT GTTTACTATC CTGATGAACG CGTCGGACAG
GCGCTGCGTG AATTTGCGGC CGCTCGGGGA CGGTCGTTTT TCGACCGGCC GGATTGGAGA
GACGAGCTGC GCGCCAAGGC TGAAGAACTG ATGAAAACCT GCACGCGCAC CGGGCTGGAG
ACCCATGATG AATTCATGCT GCGGGTGCGC CGGGAGCTCG CGGACTCAAA AACCGTACTG
GAGGAAAACC TGGGCAAGAA GATCGATTTC TTCTGCTGGC CGGGAGGTGG TTACACTGAG
GAAGTGTTTG ACGCGGCCGC CGAGTACTAT GTCGGCACCA CCGTCGGGTC TCGGGAACGG
CTCCGGCCGG CGGCCCTGGA CGCGAAGGGG TGTTTCCGCT TTTCCCGCGT AGGGCCTCCG
GGGGTCGAGG GGCGCATGGG GTTTCGCTAT CTCGGTCCGT GGCTGCTGCC GCTGTTTCTG
GAGGAGGTGC GGGGCGGAAG CCGCCTGGCG CGGCTCTTTC GGGGAGGCGG GAAGCTCGCG
GTCGAAAACT GGGAAAAAAT GAAGATAGCC ATGCTTGGGC GGGTGAGGGA CGAATCGTGT
CACGAATAA
 
Protein sequence
MSRPGTSSVM FHTVGVPDRR WAWSFLTVPW QLFDAQLRAL RRFGYRSVFL REYMDIALAG 
RLGQERVVSL TFDDGYLDNW VYAAPLLKKH GFCATIFAST DFVDPASEPR PQFDPLRPDS
ARLPGAGFLS WSEMRALEQS GVMEIQSHGI THTWYPCGPG IVDFRHPGDT HYWMDWNASP
ADKWRYLDFK SDPGVWGEPV YEHAKSMDGP VYYPDERVGQ ALREFAAARG RSFFDRPDWR
DELRAKAEEL MKTCTRTGLE THDEFMLRVR RELADSKTVL EENLGKKIDF FCWPGGGYTE
EVFDAAAEYY VGTTVGSRER LRPAALDAKG CFRFSRVGPP GVEGRMGFRY LGPWLLPLFL
EEVRGGSRLA RLFRGGGKLA VENWEKMKIA MLGRVRDESC HE