| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2154 |
|---|
| Symbol | |
|---|
| ID | 8377829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2466871 |
|---|
| End bp | 2468460 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645001377 |
|---|
| Product | transcriptional regulator, NifA subfamily, Fis Family |
|---|
| Protein accession | YP_003158654 |
|---|
| Protein GI | 256829926 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.414477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGG CAACAAATAT GAGGACGCAC TCGTCGCGCA TGATCGGTGC GCAGGCCATG
GGCCGCGAGC TTGTCTCGTC CCTGGGCAAG GTCTCTTCGC GCAACCTGTT TCTGCAGAAC
CTGTCTCGGC TTTTCCGCCA GCAATTCAGT TTTGACCGTC TTTGCATCAA CCTCTACGAT
CCCAACAGCG AGCTGCTGAG CTACTTCACC GCTGCGGAGG GAGCGGTCAT CAATTCCCTT
TCCCCGATTC GCAAGGCCGA GAAGACCACC GTCGCCGGGC ATGTCATCGA GTCGCGCAAG
CCTGTCGTCA TCACCGACGT TTCGCAGCAT TTCGTGGAAT CCATGCTCCA TCCCATGGCC
GAGGCGGGTC TGACCACGAC CATGGCTTTT CCGCTCATCC TCAACGACAA GATCATCGGC
ACCCTGCACT GCTCCTTCCG GAAGAAACCG GAGAACCTCT ACGAGATCAT GGAGTTCTTG
CTGGAGCTTT CCCCCTATGT GGCCGCGGGC CTGGGGGCGC TTCTGGCCAT GGAGCACCTT
GAACAGGGCG CCAGCCTGAA TCAGGTTCCG TACACCGGCG AGACGGGTGA GAGCGAGACG
TTCTTTTTCG AAAGCCAGTC CATGCGTCGC TTCATGGCCA GGGTACACGC CGTGGCGGTG
CTGGATATTC CCGTGCTTAT CCTCGGAGAG ACGGGAACCG GCAAGTCGCG GCTGGCCCAT
TACATACATT GCCGCAGCCA GCGCCGCGAG AAGCAGTTCG TGAAGGTCAA CTGTCCGGCC
ATGGCCTCGA CGCTTTTTGA GAGCGAACTC TTCGGCCATG CCAAGGGGGC GTTCACCGGG
GCGGCGACGA AACGCGTCGG CCGGTTCGAG CTGGCCCACC AGGGGACGCT GTTTCTGGAT
GAGATCGCCG AACTCAATCA GGAAATGCAG AGCAAGCTGC TGCATGTCCT CGATGACAGC
TGTTTCGAGC GGGTCGGGGA AAGCGTGTCT TTTTCCGTCG ATGCCCGGAT TATCGCCGCG
ACCAACGTCA AGATGCGCGA GGCCGTCACG CAGGGGAAGG TGCGCAGCGA CTTTTACTAC
AGACTGTCGT CCTGCACGCT GGAGATTCCG CCCCTGCGCG ACAGGATTGA AGACATCCCC
GCATTGTCGA GCTATTTTGT CAGCCAGCTC TGTTCGCAGT ACTCCCTGCC GCAAATCCAG
CTATCCCAGG ATCTGCTGCA CCAACTCCAG ACGCACTGCT GGCCGGGCAA TGCCCGCGAA
TTGCGAAATG TCATCAGCAC CCTGCTCATA AAGCATGGGC TTTCCGGAAA GCTGAGTCGC
CAGGATGTCC AGGATGCGCT GCGTACGGAT GCGCTGGCTT ATCCGCAGGC GTCGCCTGAG
TCCCTTCCGG CACCGCCGAT GCCCCCTTCG AGCTGCAGTC TTGAGGAGGT GGAGCGGCAG
CATATCAAAG AGGCCCTGTT CCGCTCCGGC GGCGTCATTT CCGGGCCCAA GGGCGCGGCG
AAGATGCTCG GCCTGTCGCG TTCGACGCTG CAGAGGCGCA TGCTCAAGCT GGGGATAGAT
GCTTCGGCTT CGAAAAACGG GGCGCGGTGA
|
|---|
| Protein sequence | MDSATNMRTH SSRMIGAQAM GRELVSSLGK VSSRNLFLQN LSRLFRQQFS FDRLCINLYD
PNSELLSYFT AAEGAVINSL SPIRKAEKTT VAGHVIESRK PVVITDVSQH FVESMLHPMA
EAGLTTTMAF PLILNDKIIG TLHCSFRKKP ENLYEIMEFL LELSPYVAAG LGALLAMEHL
EQGASLNQVP YTGETGESET FFFESQSMRR FMARVHAVAV LDIPVLILGE TGTGKSRLAH
YIHCRSQRRE KQFVKVNCPA MASTLFESEL FGHAKGAFTG AATKRVGRFE LAHQGTLFLD
EIAELNQEMQ SKLLHVLDDS CFERVGESVS FSVDARIIAA TNVKMREAVT QGKVRSDFYY
RLSSCTLEIP PLRDRIEDIP ALSSYFVSQL CSQYSLPQIQ LSQDLLHQLQ THCWPGNARE
LRNVISTLLI KHGLSGKLSR QDVQDALRTD ALAYPQASPE SLPAPPMPPS SCSLEEVERQ
HIKEALFRSG GVISGPKGAA KMLGLSRSTL QRRMLKLGID ASASKNGAR
|
|---|
| |