| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2130 |
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| Symbol | |
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| ID | 8377805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2438615 |
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| End bp | 2440207 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645001353 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003158630 |
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| Protein GI | 256829902 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCACA GACTCGTGAA AGTATGCATA TTTGCAGATG ATTTTATTAT TTCCGGCGTA
CTGAAGAGTG TGGATCCGCT TCCAAATCTT GAGTATGAGA TATTCACATC TGAAGTAGTT
GATTTCGAAG TATTAAGAGA TTTTTCAATA ATCATTTTGA ATACTGCATT CAGCTCACAA
ATGATTCGTA AAATATATGA CGCGAAAAAA AGCGAATCAA TTTTCGTTGT GTGTTCAAAT
TTTCAAGATT TTAGAGTCTG TTCAGAGAAT TACAAGTATT TCGATGAATT GTGGACAGGG
CCGTTGGATG CTGAAAAAAT TGCATTTCTG TTTGGCAAGA TTGTTTCACG CATAAAAAAG
AATGAAGATT CCTGTCTGAC GGAAAAATAT CTCGATACGC TCATTGACAG CCTGCCTGAT
CTGATATGGT TCAAGGATGC CCGTGGAGCT CATTTGCGGG TGAACAAGAG CTTCTGTGAA
GCGGTCGGCA AAACGAAGGC GGATGTTCAA GGCCGTGGTC ATTATTATAT ATGGGACATC
GAACCTGATG AATATGCCAA AGGGGAATAT GTCTGCCTTG AGTCGGAGGA AATAGTTCTT
CGGGAAAAGA AGAACTGCCT TTTCGACGAG ATGGTCAAGA TCAAAGACTC CATGCGTAAA
TTCAAGACGT ACAAGTCGCC TCTGTTCGAC CGCAACGGGG ATGTGCTCGG CACGGTAGGG
GTCGCGCGCG ATGTCACGGA CCTGCAGAAT CTTCAGATAG AAATGAACAT CCTTTTCGAG
AGTTTGCCCT TCGGCGTGAT TGCCACCGAC AAGGATCAGC ACGTCACGGG GGGGAACCAG
AAATCCCTCG CTTTGTTTTC CGCCCAGTCG AAGGGATTGC TTGGGAAAAA ATTTGATGGG
CTGCTCAAAG CCTTTGCGGA TGACTGTTCA TCGGAACAAC GGTTGATCGA GGATTCCAGG
GATGGGGTTT TTCTTCTCGC CAGTGAGCGT GTTTTCAAAA TACAACAGGA AAAGCTGCTT
GATGTATTCA GCGAATTCGC CGGATATATC TATTTGTTTC TCGATGTTAC AAAAGAGTAC
TATCAGAAGC ACCAACTCAT CTTCGACGCC AATACGGACT ATCTGACCAA GCTGAACAAC
CGCCGTAAAC TGCATGATTT TTTGCGGGAT ACCCCGTGCA TGTCCGGAAC GGCGTTGCTG
CTGGCCGACC TCGATAATTT CAAACAGATC AACGATCAGT ACGGCCATGA TGAAGGGGAC
AGGATACTTG TCGCGTTTGC ACACATACTG CGGGATAATT TTGACCCGGA GAACATTTTT
CGTTTAGGGG GCGATGAATT CGCCGTCCTC TTTCCCGGGA CTCGGCACGC CAAAGAACAG
ATGCTGGAAA CGGCACACCG TTGCGCCAGG GTCATCATCT CGGAACTTGA AAAATTATCC
ATACACCAGG ATCTTTCGGT AAGCATCGGC ATCGCAGTGA CTTCTTCGGA CGATGAGGAT
TTCGGGTCGC TGTTCAAGAA AGCGGATATC GCGCTCTATG ATTCGAAATG TTCAGGTAAG
AACACCTGCT GTCTCTGGTG CGGAGGGGCG TGA
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| Protein sequence | MYHRLVKVCI FADDFIISGV LKSVDPLPNL EYEIFTSEVV DFEVLRDFSI IILNTAFSSQ
MIRKIYDAKK SESIFVVCSN FQDFRVCSEN YKYFDELWTG PLDAEKIAFL FGKIVSRIKK
NEDSCLTEKY LDTLIDSLPD LIWFKDARGA HLRVNKSFCE AVGKTKADVQ GRGHYYIWDI
EPDEYAKGEY VCLESEEIVL REKKNCLFDE MVKIKDSMRK FKTYKSPLFD RNGDVLGTVG
VARDVTDLQN LQIEMNILFE SLPFGVIATD KDQHVTGGNQ KSLALFSAQS KGLLGKKFDG
LLKAFADDCS SEQRLIEDSR DGVFLLASER VFKIQQEKLL DVFSEFAGYI YLFLDVTKEY
YQKHQLIFDA NTDYLTKLNN RRKLHDFLRD TPCMSGTALL LADLDNFKQI NDQYGHDEGD
RILVAFAHIL RDNFDPENIF RLGGDEFAVL FPGTRHAKEQ MLETAHRCAR VIISELEKLS
IHQDLSVSIG IAVTSSDDED FGSLFKKADI ALYDSKCSGK NTCCLWCGGA
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