Gene Dbac_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2121 
Symbol 
ID8377796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2430526 
End bp2431050 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content52% 
IMG OID645001344 
Productisochorismatase hydrolase 
Protein accessionYP_003158621 
Protein GI256829893 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.29808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CAAATCGAGC CCTCCTCGTC ATCGACCTGC AAAACGACTA CTTTCCCGAT 
GGAAAATTCC CCCTGTGGAA CACCGAAAGC ACGCTGACCA ACGTTCAGAA TGCCATCAAA
AAGGCCATCT CAAACGACAT CCCGGTCATC CTCGTTCAGC ACGTCGCAAG CGGCAAAGCA
GGAGCCGCGC CCTTCTTCAA TGCGGGAACT CCTGGAGTCG CCTTGCATCC CGGCATTCTT
GAAGTCGCGC ACGACGCGAA AATCGTCATC AAGAAATTCG CGGACAGCTT TCTTGAGACC
AATCTTGAAA ATATACTTGC TGAGGAAAAG ATCGAGGAAA TACTCTTGTG CGGGATGATG
ACCCAGAACT GCGTTACGCA CACTGCGCTT TCAAAGTCGG CGGAAAAATA CAAGATCTCC
ATCCTGGCGG ACTGCTGCAC CACGGTCAGC GAAATGATTC ACAACATCGC CTTAAACGGC
CTGGCCCCGC GAGTGACGCT GACAACGTCC ACGGACGCTC TTTAA
 
Protein sequence
MKKANRALLV IDLQNDYFPD GKFPLWNTES TLTNVQNAIK KAISNDIPVI LVQHVASGKA 
GAAPFFNAGT PGVALHPGIL EVAHDAKIVI KKFADSFLET NLENILAEEK IEEILLCGMM
TQNCVTHTAL SKSAEKYKIS ILADCCTTVS EMIHNIALNG LAPRVTLTTS TDAL