Gene Dbac_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2004 
Symbol 
ID8377679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2304592 
End bp2305401 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID645001230 
ProductOrnithine carbamoyltransferase 
Protein accessionYP_003158507 
Protein GI256829779 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATCC ATCCCTTCTT CCGTCTGGTG GCCATCGGAG CCCTGTGCTT CCTTTACATT 
CCCCTCTTCG CCGTGGCCGT GTTCTCCGTC AACGCGTCGC GCTTCGGCCT GACCTGGAAG
GGCTTCACCC TGGACTGGTA TTTTCAGCTG GCCGCCAACT CCCTGGTCCT GGAAGCGGCC
CGCAACACCC TCTTTCTGGC CGTTGTCTCG ACCATGGTCT CCACGGTTTT GGGCACGGCC
GTGGCCATCG GCATCAAGCG CCACCCCTGG GGCAAGCGCT GGGCCGGATT CTTCGACCTG
ATCCTGCATC TGCCCGTGGT CACGCCGGAG ATCGTCTTCG CCGCCGCCCT GGTCATCGCC
TTCGCCCTGC TGCGCTATGT TTCGTCGATC TTCGACCCGG GCATGCTGAA CATGGTCATC
GGCCACATCA CCTTTCAGAT CGCGTTCGTG GCCCTGGTCG TGGGCAGCCG TCTGGCCGCC
ATCTCCACGA AAATAGAGGA GGCCGCCCGC GACCTCTACG CCGACAACCT CTTTCTGCTG
CGCCACGTGA CCCTGCCGCT GCTGCGGCCC GGCATCGTGG CCGGGGCCAT GCTGGCCTTC
ACCATGTCGC TCGATGACTT CGTCATCAGC TTCTTCACGG CCGGGCCGTC GTCCATGACC
CTGCCGCTCT ACATCTATGC CCAGGTCCGC CGGGGAGTGA CCCCGGACAT CCACGCCCTG
TCCACCATCG TTCTGCTGAT CACCATTCTG GCAGTGGTTA TCGCTGAACG TTTTTCACGC
ACTTCCACCA AGGAGAAAAA ACATGCGTAA
 
Protein sequence
MKIHPFFRLV AIGALCFLYI PLFAVAVFSV NASRFGLTWK GFTLDWYFQL AANSLVLEAA 
RNTLFLAVVS TMVSTVLGTA VAIGIKRHPW GKRWAGFFDL ILHLPVVTPE IVFAAALVIA
FALLRYVSSI FDPGMLNMVI GHITFQIAFV ALVVGSRLAA ISTKIEEAAR DLYADNLFLL
RHVTLPLLRP GIVAGAMLAF TMSLDDFVIS FFTAGPSSMT LPLYIYAQVR RGVTPDIHAL
STIVLLITIL AVVIAERFSR TSTKEKKHA