Gene Dbac_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1957 
Symbol 
ID8377630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2251812 
End bp2252531 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID645001182 
Productelectron transport complex RsxE subunit 
Protein accessionYP_003158461 
Protein GI256829733 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.875572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA TGATGAAAGA ATTCACCAAA GGACTCTGGA ATGAACTTCC ACCGTTCCGT 
CTGGTGCTGG GCCTTTGTCC TGTCCTTGCA GTGACGACCA CTGCCAACAA CGGTCTGGGC
ATGGGGGCTG CGGTTATTTT TGTTCTTTCT CTTTCCAACG TCATTATTTC GCTCGTGCGA
AACATTATTC CGAAAAAAGT CCGCATCGTC TGTTTTATTG CCATTGCGGC TTCTCTGGTT
GTTACTGTCG AAATGCTTAT GCAAGCTTTC GCTTATCCGC TTTATCAGCA GTTGGGCATA
TTTGTTCCAC TTATTGTCGT AAACTGCATC ATTCTTGGTC GTGCGGAAGC TTTTGCGGCA
AAAAATCCCC CTCTCCTCGC TTTGGCTGAC GGGCTTGGGA TGGGAATCGG TTTTACTCTG
TCTCTCACTT TCCTTGGCAG TCTTCGTGAA ATTTTTGGTT CGGGCACATG GTTCGGTATG
TCACTGTTCG GGCCGGATTT TCATCCCTTC ACGTTCATGG TTCAAGCACC AGGAGCCTTT
GTCTGTCTGG GTTTGATTCT GGCCGGAATG AATTTTCTCA ATGTCTGGCA GGCCAAGCGT
AAGGGCGTTG AACTTGATCC CAATTTCGAC GCGGGTTGTG CTGGTTGCGC TGCCTGCAAA
GGGTTGGAGA AAATCGTCAA CCAAAAGAAG CTGGAACGGC TTGAAGCAGC CAAAGGCTAA
 
Protein sequence
MASMMKEFTK GLWNELPPFR LVLGLCPVLA VTTTANNGLG MGAAVIFVLS LSNVIISLVR 
NIIPKKVRIV CFIAIAASLV VTVEMLMQAF AYPLYQQLGI FVPLIVVNCI ILGRAEAFAA
KNPPLLALAD GLGMGIGFTL SLTFLGSLRE IFGSGTWFGM SLFGPDFHPF TFMVQAPGAF
VCLGLILAGM NFLNVWQAKR KGVELDPNFD AGCAGCAACK GLEKIVNQKK LERLEAAKG