Gene Dbac_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1948 
Symbol 
ID8377620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2240700 
End bp2241659 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content64% 
IMG OID645001173 
Productprotein of unknown function DUF34 
Protein accessionYP_003158452 
Protein GI256829724 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCCT CGACCCTGAT CTCCCGCATT GAATCCACGG CCCCGCCACA GCTGGCAGCG 
TCCTGGGACA AATGCGGCGT GCAGATCGCC TCTGCCGCTT CGGAGGTCAA GACGTTGTGC
GTGGCCCTGG ACCCCAGTGC CGAAACTGTA CGCCAGGCGG TGGATCACGA GGCGGATTTT
CTGCTCTGCC ACCACCCGCT CAGTCTCTCG CCCCGGCTGC CGAGCCGCCT GGACGACTTT
CATGAGGTCC TGCGGCTGAC CCTGGGCACC TCTTTGTGGC TTTACAGCGC ACACACCTCC
CTGGACGCCA ACCCGGACGG GCCGGTCAAC TGGCTGGGCC GCGCCCTGCG GATGCAGGAC
ATGCGCATCC TTGAAGTGAC CCGCCGCGAA ACGCCGGTGG TCGTGCGCCT GACGGACCCG
GCCGTGCAGG AAAAAGTCCG GGATTTCGGA GGCAACCTCG CCCGCCGCGA CGGACACATG
GAAGAATATC TCCTCTGGCC GGATGAAAGC GCCGCTTTCA AAGCCAGGCT GGAACCCGGA
TCATCCTTCC AGGAGATCGC CCTGGCCGCG CCGATTCGTG AATACGGTTT CGGATGCATC
GGAACGTTGC CGGTTGCCCT GGCCTGGGAT GAATTCGCAG CCCATCTGAG CGCCCTAGGC
CTGCCGCTGT CGCGCATGGT CGGGCAGGCT CCGCAGAGCG TCATCCGAGT GGCCTATTGC
CCCGGATCGG GAGCCGAGCT GGGACCGGCC GCCTTCGCGG GAGGCGCGGA CGTCTATCTG
ACCGGCGACG TCAAATATCA CCAGGCCCAG GCCGTGCAGG ACCTCGGCCT GACCATCGAT
GTCGGACATT TTTGTCTTGA AGAGACCATG ATGCGCATCT GGAGCGAAGG CCTGGACCGC
GACCTGTCCC CCGAGGGAGT TCGGGTCGTC TTTCTGTCGG GCCGCAATCC TTTTGTTTGA
 
Protein sequence
MHPSTLISRI ESTAPPQLAA SWDKCGVQIA SAASEVKTLC VALDPSAETV RQAVDHEADF 
LLCHHPLSLS PRLPSRLDDF HEVLRLTLGT SLWLYSAHTS LDANPDGPVN WLGRALRMQD
MRILEVTRRE TPVVVRLTDP AVQEKVRDFG GNLARRDGHM EEYLLWPDES AAFKARLEPG
SSFQEIALAA PIREYGFGCI GTLPVALAWD EFAAHLSALG LPLSRMVGQA PQSVIRVAYC
PGSGAELGPA AFAGGADVYL TGDVKYHQAQ AVQDLGLTID VGHFCLEETM MRIWSEGLDR
DLSPEGVRVV FLSGRNPFV