Gene Dbac_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1942 
Symbol 
ID8377614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2231882 
End bp2233159 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content61% 
IMG OID645001168 
Producthypothetical protein 
Protein accessionYP_003158447 
Protein GI256829719 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit 
TIGRFAM ID[TIGR01905] doubled CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGGA AGAAAAGAAA TCTGATTCTT CTGGCGTTGG CGGCCTGGAT CGCCCAGCTG 
GGATGCATGG CGACAGAGCC GGAGGTGAAC GTCGCCCAGC TCACCTCGAA ACCCAAGGCT
TACGTAGGTT CGGAGCAGTG TAAGACGTGC CACCTCGAAC ACTACGACTC CTGGAAGATG
ACCCTGCACA GCCGCATGCT GCTGGACGCG AAGGCCAACC AGGACGCCAT CGTGACCGAA
CTCGACCCCG CGGCCATCCG GGCCGACCTG GAAAAAATCA AGGACTCCCT CAAAATCCCC
CCGGACCAGT TCTACATCCC CAAACCCGAA GAGGTCCTCT TCACCATCGG CAGCCAGTGG
AAGCAGCGCT ACCTCGTCCA GAAGGACGGC ATGCTCGTCA TGGCCCCCAT CCAGTACAAC
ACCGACACCG GCCGCTGGGT GAACTACAAT GAGGACAAAT GGGACAAAAA CTCCTGGATC
TTGAAGTGCG GCGGCTGCCA TGCGACCGGC GTGGACCTGG AGAAAGGCAC CTTCGAACCG
TCCGTAGGCT GCGAGGCCTG CCACGGTCCC GGCTCCTGGC ATGTGGCCTT GCCCAAGAGC
GCCCTGTTCG AGAAGCGCCA GACCGTGGTC AACCCAGCCA AGCTGACGCC AGGAGTGGCC
GTCCAGATCT GCGGTTCCTG CCACAACCGC GGCAAGGCCA CCAAAAACGA TAAGGCTGCG
TGGCCCGTCG GCTACATGCC CGGCAAGGCC CTGGAGACCT ACTTCAAGTC GACGTCTTTC
GCCGCAGGCG ACAAGCAGCA CATGTACGGC AACGAGTTCT CCAAGGCCCA CCACCAGCAG
TACATCGACT GGAAGCTGTC CAAGCACTAC ATGGAAGGCG TCGCGTGCAC CTCATGCCAC
TATGTGCACA AGCTCGGAAT TTCAGACACC AGGCTGCAGA CCAAGGAAGC CGGCTCCAAC
CAGTGCCTGT CCTGCCACAC CCAGCTCAAT CAGAACCTGG CGCATTCCAT CCACTCGCAC
GCCAACTGCG TGGGATGCCA CATGCCCAGG GTAGTCAAGA GCGCCGAGTC CGGCGACCTG
CACAGCCATG TCTTCAAGCC GCTGCTGCCC AAGGAAACCC TGGCCAATCC CGCCATCCCG
AATTCCTGCC AGACCTGCCA CAAGCACAAG GACGCGGATC TGGCCCAACT GCAGAAGCAG
TATGACGCCC TGGCGAGACT CCCAAAGCCC ATGGGTCAGT CCATCGGGTT CATCAGTGAA
GCCGGAGGGG CGCAGTAA
 
Protein sequence
MERKKRNLIL LALAAWIAQL GCMATEPEVN VAQLTSKPKA YVGSEQCKTC HLEHYDSWKM 
TLHSRMLLDA KANQDAIVTE LDPAAIRADL EKIKDSLKIP PDQFYIPKPE EVLFTIGSQW
KQRYLVQKDG MLVMAPIQYN TDTGRWVNYN EDKWDKNSWI LKCGGCHATG VDLEKGTFEP
SVGCEACHGP GSWHVALPKS ALFEKRQTVV NPAKLTPGVA VQICGSCHNR GKATKNDKAA
WPVGYMPGKA LETYFKSTSF AAGDKQHMYG NEFSKAHHQQ YIDWKLSKHY MEGVACTSCH
YVHKLGISDT RLQTKEAGSN QCLSCHTQLN QNLAHSIHSH ANCVGCHMPR VVKSAESGDL
HSHVFKPLLP KETLANPAIP NSCQTCHKHK DADLAQLQKQ YDALARLPKP MGQSIGFISE
AGGAQ