| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1900 |
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| Symbol | |
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| ID | 8377572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 2192581 |
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| End bp | 2193798 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645001128 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003158407 |
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| Protein GI | 256829679 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.56282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTAG GAAAAGAAGT GCTCGCGACG TATGACTCCA TGCTCACCGG GGATATTCTT
TTCGAGCGCA GCATCACTCC CATGGTGATC GTGGACAGTC AACGCATCAT GGTCAAGGCG
AACATTCGTT TTTGCGATTT GTTCGAGTAT TCGCGGGAAG AGATCCTCGG CCAGTCCACA
GCCATGTTGA CTCCATCCCT GGAACATTTT GAGAGCTACA AGCAATGCTT CGAGCGAACA
CGCGACGGAT CCTTGCAAAG CCGCGACCTG CTTTACAGGA AAAAGGACGG CGCGCTTTTC
TGGGTTAAGC TGACGGGCGT GCCCATCGCG ACTGACGTTC AGCAATTTGT GCTGTGGTCA
TTCGACGATA TAACGGAAGA AGTTAATGCC CGTGAAGAGA TCAGGAACCG TTATCGGGAA
CTTGAGATCA TCTTCGAGAA GGTTCGTGCG GGGCTTCTGT TTGTGGTCGA CGGGGTGATC
AATCGAGTCA ACCAGTCTTT TCTGAGAATG CTCAACGAAA AGCAGGAAAA CGTTGTGGGT
CGCAACGTGA CGATCTTTTT GGACTGTTTT GAGAAATGCA AGACGGAGGG AACAAAAAAG
CTCGTTCGTT TTCGCAATCG CGATGGTCAC GTGACAATCG TCGAAAGGGA GATTGTCCCC
GTCACCGAGA ACAGCCACAT CATTGTCTTC ATCGACATCA CCGCACATGT GCAGGAGAAG
GAGGTGTTGA CGAAGAAATC TCAAATCGAT GGTCTGACCG GAATTTTCAA TCGCAACACT
TTTGTCCAAT TCGCTCAAGA GATGCTCCTC AGCCCTGCGC ACGAGTTTGC GTCCTTCATG
CTTTTCGACA TAGATCATTT CAAGGAGATC AATGACACCT ATGGCCATGA CATTGGTGAT
GAGGTGCTGA TTGAGCTTGT GCGTCTGATC CAGCAGCTGC TCCGGCGGGA GGAGATTTTT
GGCCGCTTCG GAGGCGAGGA GTTTGGCATT CTTTTCCCCG TTGCCCAGGA TCAGGCCAAG
GTCATAGCGC AGCGGCTGTT GGAGGCCATC CGCCAGCACA GGTTTACCCG CGGGAATCTC
GCCGTGACCG TCAGCATGGG GCTGGTGGAC AATTCGTTTT CCAATGTTTT CGACACGATG
TATAAGGAGG CTGACCGCCT GCTGTATATC GCCAAGAACA GCGGTCGCGA TCGTCTGGAA
TGTTGTGCGC TCCGCTAG
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| Protein sequence | MTLGKEVLAT YDSMLTGDIL FERSITPMVI VDSQRIMVKA NIRFCDLFEY SREEILGQST
AMLTPSLEHF ESYKQCFERT RDGSLQSRDL LYRKKDGALF WVKLTGVPIA TDVQQFVLWS
FDDITEEVNA REEIRNRYRE LEIIFEKVRA GLLFVVDGVI NRVNQSFLRM LNEKQENVVG
RNVTIFLDCF EKCKTEGTKK LVRFRNRDGH VTIVEREIVP VTENSHIIVF IDITAHVQEK
EVLTKKSQID GLTGIFNRNT FVQFAQEMLL SPAHEFASFM LFDIDHFKEI NDTYGHDIGD
EVLIELVRLI QQLLRREEIF GRFGGEEFGI LFPVAQDQAK VIAQRLLEAI RQHRFTRGNL
AVTVSMGLVD NSFSNVFDTM YKEADRLLYI AKNSGRDRLE CCALR
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