| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1861 |
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| Symbol | |
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| ID | 8377533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2120800 |
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| End bp | 2122497 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645001089 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003158368 |
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| Protein GI | 256829640 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.244613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGAA CGCTTGTCCA TCGGCTCCTT CTTTCCGCCG CCTTAGCGGC TTCCCTGGGG
TGCGCCCACC GAACCGAGCC GCTGCCCCCA ATGACACCGC CCGCTCCTGT ACCGGCTTCA
TCCGAAGCCG AGGCCATCTA TTCCTATCTG GCCTATCGCG AACTGCTGCA AGAAGACAAA
AATGACCAGG CGGCCCAGGC GCTTGAGCAG GCCATCGCGC TCAAGCCCAC GCCCGAACTC
TATCTTGAAC TGGGCAACCT GCACTGGCGC GCCTCCAGAT TTTCCGATGC CCTGCTGGTC
TTGAACCAGG GCCTGACCAG CTACCCGGAC TCGGAAGCCC TGCTCAGCAC CCTGGCCAAA
ACCTATGCGG CCCAGGGTCG TTTCGACGAC GCCGTGCTCG TCCTGGACGA CTACCGCAAA
AAGCACCCCG AACAGATCGA ACTGGCCCAC GAAGCGGCGC TTTATCGTCT GGAGCAGGGA
GAGTTCGGCG AAGCTGTGGA CAGGCTGAAC GCCATTCCGG AAAAAGACGT CAACCAGACT
ACGAAATTTC TCCTCGGCAA GGGCTTTTTC GGTCTTGAGC TCTATGACAA GGCGATCACC
GCCTACCAGC AGGCCGTGGC CATCGACCCC GAATATTACA ACGCGTGGAT AGAGCTTGGA
CTGACATACG AGGTACAGAA AAATTATATC GACGCGGAAC GCGTTTTTGC CAAACTCGTC
GATTTGGGGA TCGGGAACCA GCAGATTCTC TTTCGCCTGA TCGAACTCAA CTTGAAGCTC
AACAATCCCG ACCAGGCCCT GTCCTATGTG GAGCAGGGCT CGGATGATCA GGCGCTGGTT
CTGGAAGCGG TCAATCTGCT GCTCAACCAG GACTTCTATG ACCACGCGGC GGAACTTCTG
GACCCCATGG CCCTGGAAAA TCCGATCCCC AGCGATGCGC TTTTTTTCCT GGCCGTGCTG
GAATACGAAG GCCGCGATAA TCCGGACAAG GCCATGACCT ATCTGGAAGC CATACCTGCG
GGGCATCAGC ATTATGAGCG CAGCCTGATA TTCCGCATCC ACCTTCTCTA CCAGAAAAAC
GACAGGGCTA CGGCCAAAGA GCTCTGTCTG TCGGCCATGA CGCTTTTTCC CAAGCAACCT
GAATTCCGCA TCATCATGGC GGAGATCCAC GAATTTGAAA AAGAGTACCA GCAGGCGCTG
GACGTGCTGC TCAAGGCCAC GGGAGTCTGG CCGGACAACA CGACCATCCT TTACCGGCTG
GGCCTGATCT ACGATCGCAT GGATCACCGG GACCAGGCCA TGATCATGAT GGAAAAGGTC
ATCTCCAAAG ATCCCGAATA CGCCGATGCG CTCAATTATC TGGGCTACAC CCTGGTGGAA
CTGGGTCGCA ACCTGGAACG GGCGGAGGTG CTGATCGAAA GCGCCCTCAA GGTCAAGCCC
GACAACGGTT ACTTCGTCGA CTCTCTGGCC TGGGTCTACT TCAAACAGGG CAAAAACAAG
CGCGCCTGGC AGGAGATCAA GCGTGCCGTT CAGCTTGTGG ACTCGGACCC GGTCATCTGG
GAGCATTACG GGGACATCGC CCGCGCCATG GGATTTATCA CCGAGGCTCG CCGAGGTTAT
GCAAAGGCCC TGGATCTTGA AGGCGAAAAC GCCGAAGAAG TGCGGGCCAA AATGAATGCT
CTGGGCCGCA CACGATGA
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| Protein sequence | MIRTLVHRLL LSAALAASLG CAHRTEPLPP MTPPAPVPAS SEAEAIYSYL AYRELLQEDK
NDQAAQALEQ AIALKPTPEL YLELGNLHWR ASRFSDALLV LNQGLTSYPD SEALLSTLAK
TYAAQGRFDD AVLVLDDYRK KHPEQIELAH EAALYRLEQG EFGEAVDRLN AIPEKDVNQT
TKFLLGKGFF GLELYDKAIT AYQQAVAIDP EYYNAWIELG LTYEVQKNYI DAERVFAKLV
DLGIGNQQIL FRLIELNLKL NNPDQALSYV EQGSDDQALV LEAVNLLLNQ DFYDHAAELL
DPMALENPIP SDALFFLAVL EYEGRDNPDK AMTYLEAIPA GHQHYERSLI FRIHLLYQKN
DRATAKELCL SAMTLFPKQP EFRIIMAEIH EFEKEYQQAL DVLLKATGVW PDNTTILYRL
GLIYDRMDHR DQAMIMMEKV ISKDPEYADA LNYLGYTLVE LGRNLERAEV LIESALKVKP
DNGYFVDSLA WVYFKQGKNK RAWQEIKRAV QLVDSDPVIW EHYGDIARAM GFITEARRGY
AKALDLEGEN AEEVRAKMNA LGRTR
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