| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1847 |
|---|
| Symbol | potC |
|---|
| ID | 8377519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2105589 |
|---|
| End bp | 2106353 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645001075 |
|---|
| Product | spermidine/putrescine ABC transporter membrane protein |
|---|
| Protein accession | YP_003158354 |
|---|
| Protein GI | 256829626 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0489966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGC TGCGCATTCT TTACGTCACG CTGGTTTTTG TCTTCCTGTA TTTGCCGCTG
GGCGTCATGG TCGCCTATTC GTTCAACTCG TCCCGTTTTT CCATGGCATG GAAGGGCCTG
ACCCTTGACT GGTATGTAAA GCTCTTCGGC AACACCGCGC TTATGCAGGC GGCCCTGCAC
TCGCTGCTTA TCGCGGCGCT GGCGGCAACC TGCTCAAGCA TCCTGGGCAC GCTCATCGCC
ATGGCCCTGC AGCGCTGGCG CTTTCCGTCG CGCAAGGTCA TCCACACCTC GCTTTTCGTC
ATGATGATGT CTCCGGACAT CGTCATCGGC ATTTCGCTGT TGGTGCTCTT CATGGCCCTG
TCCCTGCCGC TGGGGTTCTG GACCCTGCTC ATGGCCCACA TCACCCTGTG CGTGCCCTTT
GTCAGCATCA CCGTCTACGG CCGTCTGCAG GGGTTCGACC CGCACGTGGT GGAAGCCGCC
CGGGACCTCG GGGCGGGCGA GTACGAGGTT TTCAGGCATG TGGTCCTGCC CATGGTCTTT
CCCGCTGTCC TGGCCGGGTG GTTTCTCAGT TTCACCCTGT CAATCGACGA CGTGATCATC
AGCTTCTTCA CCACCGGACC CACGTTCGAG GTCCTGCCTT TGCGCATCTA TTCCATGGTC
CGCCTGGGAC TCAAGCCCGA GGTCAATGCC CTGTGCGCGA TCATGATCCT TATAACCGTT
GTGGCTGTCT TCGTGTCGCA GCGCTTCCTG AAGGAGAAAT CATGA
|
|---|
| Protein sequence | MRKLRILYVT LVFVFLYLPL GVMVAYSFNS SRFSMAWKGL TLDWYVKLFG NTALMQAALH
SLLIAALAAT CSSILGTLIA MALQRWRFPS RKVIHTSLFV MMMSPDIVIG ISLLVLFMAL
SLPLGFWTLL MAHITLCVPF VSITVYGRLQ GFDPHVVEAA RDLGAGEYEV FRHVVLPMVF
PAVLAGWFLS FTLSIDDVII SFFTTGPTFE VLPLRIYSMV RLGLKPEVNA LCAIMILITV
VAVFVSQRFL KEKS
|
|---|
| |