Gene Dbac_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1720 
Symbol 
ID8377392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1958658 
End bp1960259 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content66% 
IMG OID645000948 
Productglycosyl transferase group 1 
Protein accessionYP_003158227 
Protein GI256829499 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAC ACTCCGGCCC GATCTGGGGC ACTCTTGATC CGTTTGTCGA AGGCGGTCCC 
GTTATCGGGC GCAAGGTCGC CAATTCCGGC TTTCTGCAGG CTTTGCTTGG GGCCGATCCT
TTCCGGGAAT ATCATTTTTT TCTTCCGGAC CGGCACAGCG GCACGGCGCT TGAAGCCTTC
GTGAACGCCG TTTGCCCGCA GGCCGCCGCC AAGGTGCGCA TCCTGCCGCG CACCGCCCTG
GCCGAACACC TGGCCGCGAA CGCCTACCAC GCCTTCCACC TCTCCGACTG CCTGACCGCC
CAGGGCTTCC TGGCCGCGCT CAGGAACCGT CTGGCCGCCA ACATCTTTCC CATCACCGGC
GTGACCCACT CCCTGTCCTA TGCACGCTAC GGGCAGTCCT TCGCCCAGCA TGTCTGGGCC
GGAGTGACGG GACGAGACTG CATCGTGGCC ACTTCAAGGG CCGGCGCCGA CGTGGTGCGG
GAAGAATTGT CCGCCCTGGC CGAGACGTTC CACGCTCCGG CTGCGCAGGT GGCCGTCGTG
CCGCTGGGCA TCTGGTGCCG GGACTTCGAT GTTTCCACGC TGGAGGGCGT GCCTGCGGTT
CCGGCCACGA AGACCGTCTT TTTGGTGCCG GGGCGCATCA GCCCGTATTC CAAGATGGAT
CTTCTGCCCC TGCTGCGGGC CTTCCAGCGC TTGCGTCAGG GCGGGGTGGA CCTGGGCGGG
GTCTGCCTGG TTCTGGCCGG GAGCCCTGAC GAGGGGGCAT CCCTGCCGCA TACCCTGACC
AACCTGGCGG CCAACATCGG GCTTGAACTT GTTCTCGTGC GCTGTCCCGA CGACGCGACC
AGGACGGCCC TGCTGCATCG CGCCGACGTG GTCGTGTCCC TGGCCGACAA CCCCCAGGAA
ACTTTCGGGC TGACGATCCT GGAAGCGGCG GCCGCCGCAA AGCCTGTCAT CGCATCGGAT
TACGACGGCT ATCGCGACCT GGTCCGTCAC GGGCGCACGG GATTTCTGGT TCCCACCCTG
GACAGCGGCG AGGTGGACGA TGTTTCGCTC CTGGCGCCGC TTCTCTACGA CAGCGCCTAC
CACCTGTGGC TGGCCCAGGA CGTGGCCGTG GATGTGGGCG AGCTGGCCGG ACAACTGCGG
GTTTTGCTGC AAAAAAGCGT GCGCGAGGAA ATGGGCCGGG CGGCCCGCGA ACATGCGCAG
GGGTTTGACT GGTCCGTAGT CATCGGACGC TATCTGGAAT TGTGGGAGCG TCTGTCGGCA
GCGCCCGCGC CCAAGCCGGG CGAGGGCGAA CACCGCCATC CGCTGGCCAT GCGCTATGAA
CGGCTTTTTG CCGGATATCC GTCGCGGCGT CTGGCGGCAG GGGATGTGCT GGAGGTAACG
GAGCTGGGAA GGGCCGTGTA TCGGGGGCAG GATTTTCCGG TGGTTTACGC GGGCATCGAA
GCCAGGATTG ACCTTGAGCT GATGCGCAAG GTGCTGGTCT GGGCCCGTAA TCCGCTTTCA
TGGACGGCCC TGCGCCAAAA GGCAGCCAGC GAGGACCGTC TGACCGCCAC GGTGCTGTGG
ATGCTCAAAG GGGATCTGCT GCGCGTGTCC GCAGGATCCT GA
 
Protein sequence
MAQHSGPIWG TLDPFVEGGP VIGRKVANSG FLQALLGADP FREYHFFLPD RHSGTALEAF 
VNAVCPQAAA KVRILPRTAL AEHLAANAYH AFHLSDCLTA QGFLAALRNR LAANIFPITG
VTHSLSYARY GQSFAQHVWA GVTGRDCIVA TSRAGADVVR EELSALAETF HAPAAQVAVV
PLGIWCRDFD VSTLEGVPAV PATKTVFLVP GRISPYSKMD LLPLLRAFQR LRQGGVDLGG
VCLVLAGSPD EGASLPHTLT NLAANIGLEL VLVRCPDDAT RTALLHRADV VVSLADNPQE
TFGLTILEAA AAAKPVIASD YDGYRDLVRH GRTGFLVPTL DSGEVDDVSL LAPLLYDSAY
HLWLAQDVAV DVGELAGQLR VLLQKSVREE MGRAAREHAQ GFDWSVVIGR YLELWERLSA
APAPKPGEGE HRHPLAMRYE RLFAGYPSRR LAAGDVLEVT ELGRAVYRGQ DFPVVYAGIE
ARIDLELMRK VLVWARNPLS WTALRQKAAS EDRLTATVLW MLKGDLLRVS AGS