Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1694 |
Symbol | |
ID | 8377366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 1926905 |
End bp | 1929244 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645000923 |
Product | capsular exopolysaccharide family |
Protein accession | YP_003158202 |
Protein GI | 256829474 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.648011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGAAA ATGGCCCTTT GGATTCGCTT CCTTCTGGTA GTCCTTCTTT TTTCCCGGCC GTGCACCCAA GTCAGGCCGT GGTGCATGCA TCGGAATTTC CAGCGTCATT TCCGCAGGCG GAAGACGAGA TCGATCTGCG GGACTGCCTG GAGGTGCTTG TTCGCCGTAA ATGGCTCATC GGCGGTGTGC TGTTCGCTGT TTTCGTGACC ACGTTCATCG TGACTCTGGC CATGACCCCG ATTTACAAGG CCACGGGCAA GCTTGAATTC AATCTGCAGC CGCCCAAGGT CACCACGTTT GAGGACATGC TCGTTCCCCA GACTCAGACC CGGGAGTTCA TGAACACCCA GACCAAGCTG CTCACCTCCG ACTCGCTGGC GTGGCGGGTG ATCGAAACCC TCGATCTGGT CCACAACCCT CGCTTCAACA CGGAGATCAC GGCCGAGGGC GAGGATTCCG GCGGCATTCT GAGCGATCTT CGCCGCATGC TGACCACGAT GCCCGGCCAG GGCGAGGACC TTGATGCGCA GGTCCGGGAG GCCGAGGTGC AGCAGCGACT GCTCAAGGTC TTCTTGGACA ATCTGGAGAT CAAGGCGGAG CGGGACACCA CCATCCTGAA CCTGGCCTTT TCCTCCCCGG ACCCGGCGCT GGCCCGGGAC GTGGTCAACA CGTTCATCGG CTCCTTCATC GCCTGGCAGC TTGACAAAAA GATCGGGGCC GCCGGCGTGG CCAACGAGCA GTTGCGCAAG CAGGTCGAGG TGGCGCGGAT CCGCCTGGAG AAATCCGAAG CGGAGATGAA CGCTTTTGCC CAGAAAGCAG GCATCGTCTC TTTGGATAGC CGCATGAACC TTGTTTACAA GCAGCTTGAG GAGATCAATT CCGCCCTGGC CCTGGCCCAT GCCCAGCGCC TCGGCAGGGA GGCCCTGGAT GCGCAGGCCC GTGAAGTCGG CGTTTCGGCC CTGCCCATGG TCATCGACAA TCCGCTCATT CAGGAACTTC GGCAGCAATA CGTCCAGCTT GAGTCCCAAT ACGAGGATAA GCTTGTCGTC TTCAAGCCCG ATTACCCTGA GGCCAGGCGG CTGAAGGCCC GGCTCGACGA TGTCGCATCC AAGATCCGCC ATGAGGAGAG CAGGATCCAG GGCGGCATCC GCAACGACTA TCTTGTGGCC CTCAAAAACG AGGAGTCCCT GCGCACGCAG GCCGATCTGG CCAAGACCAG CGCCCTGGAT CTGAACGATC GGGCCACGCA GTACAAGATT CTTGAGCGCG AAGTCGAGAC AAACAAGGAG ATTCATCAGT CCCTGCTGCA GCGCGGCAAG GAGATCGACG CAACGGTGGG CACGGACATC AGCAATATCC AGGTGGTGGA CCACGCCTTG CTCCCGGTGA AGGCGGACAA GCCGCGTATC CAGCTGAACC TGATGCTGAG CATCGGGATC GGTCTGCTGC TTGGCGTGGC CGCCGCCTTC CTGCTCGAAT TTCTGGATAA CACGATCAAA AGCATTGATG AGATCACCGA CCGCTTCGGC ATCGGCATCC TGGGCGTGCT CCCGGAAGCC GAAAAGAAAT TCGCGGACAG GCTGGACCGC CTGGTGGTTT CCGATCCCCG GGCGGGGTTT TCCGAGGCCA TCCGCACCAC CCGCGTCTCC ATTCAGCTGT CCACCGCCGC CGAGGGCGGC ACCCGTACGC TGCTCATCAC CAGCACTTCG GAAGGGGAGG GCAAGTCGAC CATCGCGGTG AACATGGCCC TGACCTTTGC CGCCGCAGGC GACAGGGTGC TCATCATCGA CGCGGATCTG CGCAGGCCCA GATTGCACCA GGTGTTTTCC CCGTCCGCTT CAGGCGGTGG GGGACTGAGC GAACTGCTCA TCGGCAGCAA GAGTCTGGAC GATGTGATCT GCGCCACCGA GCATGAGAAC TTGTTTTTCA TCCCGGCGGG ATTGGTGCCC CCCAACCCTG CCGAGCTTCT GGCCTCCAGG CGGATGCGTA TGTACTTGGA ACAATTGCAT GAGGATTTCG ACCGCATCAT TATCGACGGC CCGCCATCGG TGGGTTTCGC CGATGTGCTC GTGCTCAGCA GCCTGGCCAG CGGAGTCATT CTGATAAGCA CCCTGGGCAG GACCCACAGG CAGGCGCTGC GTCTGTTTCG GCGCTCTTTG CTCAATATCA ACGCCCGGCT GCTGGGCACC ATCGTCAATC GCCTCAATGT GCAGAACCGG TTTGGGGATT ATTATTCCAA ATATGGCAGG TATTATTACC ATCCTTACGC CTACGGCGAC GGCAGTACCG AACGTGCGCA GGGCGGCGTT CCGCAACTGG AAGAACCCCG CGCGTCCTGA
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Protein sequence | MRENGPLDSL PSGSPSFFPA VHPSQAVVHA SEFPASFPQA EDEIDLRDCL EVLVRRKWLI GGVLFAVFVT TFIVTLAMTP IYKATGKLEF NLQPPKVTTF EDMLVPQTQT REFMNTQTKL LTSDSLAWRV IETLDLVHNP RFNTEITAEG EDSGGILSDL RRMLTTMPGQ GEDLDAQVRE AEVQQRLLKV FLDNLEIKAE RDTTILNLAF SSPDPALARD VVNTFIGSFI AWQLDKKIGA AGVANEQLRK QVEVARIRLE KSEAEMNAFA QKAGIVSLDS RMNLVYKQLE EINSALALAH AQRLGREALD AQAREVGVSA LPMVIDNPLI QELRQQYVQL ESQYEDKLVV FKPDYPEARR LKARLDDVAS KIRHEESRIQ GGIRNDYLVA LKNEESLRTQ ADLAKTSALD LNDRATQYKI LEREVETNKE IHQSLLQRGK EIDATVGTDI SNIQVVDHAL LPVKADKPRI QLNLMLSIGI GLLLGVAAAF LLEFLDNTIK SIDEITDRFG IGILGVLPEA EKKFADRLDR LVVSDPRAGF SEAIRTTRVS IQLSTAAEGG TRTLLITSTS EGEGKSTIAV NMALTFAAAG DRVLIIDADL RRPRLHQVFS PSASGGGGLS ELLIGSKSLD DVICATEHEN LFFIPAGLVP PNPAELLASR RMRMYLEQLH EDFDRIIIDG PPSVGFADVL VLSSLASGVI LISTLGRTHR QALRLFRRSL LNINARLLGT IVNRLNVQNR FGDYYSKYGR YYYHPYAYGD GSTERAQGGV PQLEEPRAS
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