| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1566 |
|---|
| Symbol | |
|---|
| ID | 8377237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1774737 |
|---|
| End bp | 1776410 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645000795 |
|---|
| Product | formylmethanofuran dehydrogenase subunit E region |
|---|
| Protein accession | YP_003158075 |
|---|
| Protein GI | 256829347 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0303] Molybdopterin biosynthesis enzyme
[COG2191] Formylmethanofuran dehydrogenase subunit E |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG GATCTTCCGC CTTGAGTTAT GCCAGCCCCG TCATCGGTCC GTATACGGTC
GACGAATTCA TCGACGCGGC GGCCCGTTTT CACGGGTACG CGGCCCCGGG ACTGATCCTG
GGCGGGTTCA TGGTCCACGA GGCGCGAAGT CACATCGCCG AGGGCGTCCT GTTCGACGCC
ATTTCCGAAA CCGCCTGGTG CCTGCCCGAC GCCGTGCAGA TGCTCACCCC CTGCACCGTG
GGCAACGGCT GGATGCGGAT TTTCAATCTG GGCCTCTACG CCGTGTCCCT CTTTGACAAA
TCCACCGGCA AGGGTGTGCG GGTGGCCGTG GAGAGCGACA AGCTGGAACC GTATCCGGTC
ATCCGGGAGT GGCTTTTCAA GCTCAAGCCC AAGAAGGAAC AGGACAGTGA CCGGCTGCGC
CAGGAGATTC GCCTGGCGGG GGCGTCCATC TGCTCCGTGA AGGAGATCAA GCTGCGGCCC
GAATTCATGG GCGGCCGGGG CAAGGGCGCC ATCGCCGCCT GCCCGTCCTG CAGCCAGGCC
TATCCGGCCC GGGACGGCTC GGTCTGCCGG TCGTGCAAGG GCGAATCGCC CTATGTCGGC
TGGATTGGCG GGCACGACAG CCGCGAGCTC GGCTTTGACG GCCCGAAGCT GCGGGTAGTG
CCCACGGCCG AAGCTGTGGG CAAAAACGCC CTGCACGACA TGACCTGCAT CGAACCGAGT
GTCAGCAAGG ACGCCGCCTT CGCCCGAGGC CAGGTGCTCG ACGTGGGCGA TGTCTGCCGT
CTGCAACGCA TGGGCCGCTT CGAGGTCTAT GTGCAGGAGG ACGAGCAGGA CGAGGCCTGG
GTGCACGAGG ATGACGCGGC GCGCGTGCTG GCCTCGGCCC TGGCCGGGGA TGGCGTGGAC
AGCTCCGGTG ATCCCCGCGA GGGAAAGATC ACCATGACCG CCACCCGTGA CGGCATGCTC
ATGATCGACG AGAACGCCCT GGAGTCATTC AACTCCATTC CCGGAATCAT GTGCGCCAGC
CGTCATGCCT TCAGCGTGGT CTCGCGCGGG CAGCAGATCG CCGCCACGCG GGCCATTCCT
CTTTATCTGG GCCGCGATGT CCTGGAAGAG GCGGGCAGAA TTCTGGAAGG CGGCCCGCTT
TTGGAGGTCC GTCCCTTGCG CAAGCGCAAG GTCGGCATCC TGGTCACGGG CACGGAAGTC
TTTCAGGGCC TGGTCGAGGA CCGCTTCATC CCCATCATCG GCGCCAAGGT CGAAGCCTAC
GGCTGCCCGG TGGTGGCGAC GGACATCGTG CCCGATGACC GGGCGCGCAT TTCCCGTTCC
GTGCAGGCCA TGCTCGGGCA GGGCGCGGAG CTGATCGTGA CCACGGCCGG GCTGTCCGTG
GACCCCGGCG ACGTGACCCG GCTGGGTCTG GCGGACGCGG GGTTGGAGAA CATGCGCTAC
GGCACGCCCA TCCTGCCCGG AGCCATGACG CTCCTGGCGT CCATCGGCGA GGTCGATGTC
ATCGGCGTTC CGGCCTGCGC CCTCTATTTC AAGACTACGA GCCTTGACAT CCTGCTGCCC
CGCGTCCTGG CCGGAGCCTC GCCCTCGCGG CGTGAGCTGG CCCGGCTTGG CCACGGCGGC
ATGTGCATGC AGTGCAAACG CTGCACCTAT CCCAAATGTC CGTTCGGAAA GTGA
|
|---|
| Protein sequence | MPEGSSALSY ASPVIGPYTV DEFIDAAARF HGYAAPGLIL GGFMVHEARS HIAEGVLFDA
ISETAWCLPD AVQMLTPCTV GNGWMRIFNL GLYAVSLFDK STGKGVRVAV ESDKLEPYPV
IREWLFKLKP KKEQDSDRLR QEIRLAGASI CSVKEIKLRP EFMGGRGKGA IAACPSCSQA
YPARDGSVCR SCKGESPYVG WIGGHDSREL GFDGPKLRVV PTAEAVGKNA LHDMTCIEPS
VSKDAAFARG QVLDVGDVCR LQRMGRFEVY VQEDEQDEAW VHEDDAARVL ASALAGDGVD
SSGDPREGKI TMTATRDGML MIDENALESF NSIPGIMCAS RHAFSVVSRG QQIAATRAIP
LYLGRDVLEE AGRILEGGPL LEVRPLRKRK VGILVTGTEV FQGLVEDRFI PIIGAKVEAY
GCPVVATDIV PDDRARISRS VQAMLGQGAE LIVTTAGLSV DPGDVTRLGL ADAGLENMRY
GTPILPGAMT LLASIGEVDV IGVPACALYF KTTSLDILLP RVLAGASPSR RELARLGHGG
MCMQCKRCTY PKCPFGK
|
|---|
| |