Gene Dbac_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1440 
Symbol 
ID8377105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1630889 
End bp1631992 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content60% 
IMG OID645000664 
ProductABC transporter related 
Protein accessionYP_003157950 
Protein GI256829222 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0312892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTTC AGCTTGATTC CATTGACAGA ATCGTGGACG GCGAAACGTA CCTCAAAGAC 
ATTTCGCTCA ATTTTGAAAC AGGCCAGCGA TATGTGCTGC TGGGCCGCAC CCAGGCCGGC 
AAGACCTCAC TCTTGCGCAT CATGGCCGGG CTTGATCGTC CTTCAAAGGG CAAGGTCCTG 
GCCCACGGCA AGGACGTGAC TGGCGTGTCG GTACGCCGCC GCAGCATTGC CATGGTCTAC 
CAGCAGTTCA TCAACTACCC ATCCCAGACA ATTTTCGACA ACATCGCCTC GCCTCTGCGC 
ATTGCAGGGA TGCCAAAGGC CGAGATCACG AAGCGGGTCA TGGAGACAGC CCGGATGCTG 
CATCTTGAAC CGTTGCTCGA CCGTCTTCCG GCCGAACTCT CCGGCGGCCA GCAGCAGCGC 
ACGGCCATTG CACGGGCCCT GGTCAAGGAG GCCCAGCTTC TGCTTCTGGA CGAACCCCTG 
GTCAACCTCG ACTACAAGCT GCGCGAGGAA TTGCGCGACG AATTGCAGCA GATCTTCGGC 
CAGCGCGAGT CCATCGTGGT CTACACCACG ACCGAGCCCA CCGAGGCCCT CATGCTCGGC 
GGCAACATCA TCATCATGCA CGAGGGCAGG GTGCTGCAGA CCGGCCCCAC GGCCGACGTC 
TACCATCACC CGGCCACGAC GCAGGTCGCC GAAGTCTTCA GCGATCCGCC CATCAATTTC 
ATCACCGCCG AGGTCGATTC GGCCAAGGCC CATCTGCGCA TAGGCATCGA TCTGCCCCTG 
AGCGGGCATC TGTGCGACCT GACTCCGGGC GTCTACAAAT TCGGCATCCG CTCGCACCAT 
TTCAATCTCA CTCGCAAGAC CAGCGAGGAC GTGGAGATCC GCACCGTTGT CGAACTGGCC 
GAAATCAACG GCTCCGAAAC CTTTGTGCAT TTCCACTATC GCAACAGGTC CCTGGTCCTG 
CAGGAGCAGG GAGTGAGAAC CTACAAGGTC GGGCAGGAAA TTTCAGTCTT TGTCCGTCCT 
TGCGATGTCT ACGTGTTCGG TGAGGACGAC CGTCTGGTCA AGGCACCTGC ATGTCCCGCC 
ACGTGCGCCC AAAGCGCCAA ATAA
 
Protein sequence
MGLQLDSIDR IVDGETYLKD ISLNFETGQR YVLLGRTQAG KTSLLRIMAG LDRPSKGKVL 
AHGKDVTGVS VRRRSIAMVY QQFINYPSQT IFDNIASPLR IAGMPKAEIT KRVMETARML 
HLEPLLDRLP AELSGGQQQR TAIARALVKE AQLLLLDEPL VNLDYKLREE LRDELQQIFG 
QRESIVVYTT TEPTEALMLG GNIIIMHEGR VLQTGPTADV YHHPATTQVA EVFSDPPINF 
ITAEVDSAKA HLRIGIDLPL SGHLCDLTPG VYKFGIRSHH FNLTRKTSED VEIRTVVELA 
EINGSETFVH FHYRNRSLVL QEQGVRTYKV GQEISVFVRP CDVYVFGEDD RLVKAPACPA 
TCAQSAK