Gene Dbac_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1393 
Symbol 
ID8377058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1565296 
End bp1565937 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID645000619 
Productcytochrome B561 
Protein accessionYP_003157905 
Protein GI256829177 
COG category[C] Energy production and conversion 
COG ID[COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAA AAAAGAAAAT CTACCTGTAC ACGAGGTTCG AGCGTTTCTG GCACTGGGTT 
CAGTCCCTGC TCATCTTCCT CTTGCTGCTG ACCGGTTTCG AGGTCCATGG CACCTTCACC 
CTGTTCGGCT TCCAGAAGGC GGTGGAGTAC CATAATTTCC TCGGCCTGAC CTGGGTCATC 
CTCTTCATCT TCATCGTCTT CTGGGTCGTG ACCACGGGTG AATGGCGGCA GTACATCCCG 
ACCACCAAGA AGCTCTTCGA GGTCATTGGC TATTATTCCT CCGGCATTTT CAAGGGGCTG 
CCGCACCCGG TCAAAAAATC CAAGGAGACC AAGCACAACC CCCTGCAGCG CCTGACCTAC 
CTGGGCCTGA CCGCGATCCT GCTGACCCTG CAGATGGGCA CGGGGCTTTT GTACTACCTC 
TACAACGACT GGGCCATCTG GAACTGGACC TTCCTGGACC TGCGCCTCCT GGCGCTCATC 
CACCTGGCCT GCGCGTTTGC CATCCTGGCT TTCATCATCG TCCACGTCTA CATGACCACC 
ACCGGCCACA CCCTGACCAG CCACATCTCC GCCATGTTCA GCGGCTGGGA AGAAGTGGAA 
GAGGGCGAAG TGGCGGAGTG GGAAGTGCAG AAGAAAAGAT AG
 
Protein sequence
MSTKKKIYLY TRFERFWHWV QSLLIFLLLL TGFEVHGTFT LFGFQKAVEY HNFLGLTWVI 
LFIFIVFWVV TTGEWRQYIP TTKKLFEVIG YYSSGIFKGL PHPVKKSKET KHNPLQRLTY 
LGLTAILLTL QMGTGLLYYL YNDWAIWNWT FLDLRLLALI HLACAFAILA FIIVHVYMTT 
TGHTLTSHIS AMFSGWEEVE EGEVAEWEVQ KKR