Gene Dbac_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1259 
Symbol 
ID8376924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1391874 
End bp1393595 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content53% 
IMG OID645000492 
ProductAAA ATPase central domain protein 
Protein accessionYP_003157778 
Protein GI256829050 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.636785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGG CATTCAGGTC TGTTGAGCGG TATTTTGAAG ATGACCTCAA GGTGTTCGGT 
TTTGGAGCCA CGGATTTCAT GGCCCATATG CTCGGCATGT CAACATCGAA ATGTCGACAG
ATTATTCAGC AATTAATCAA CCTTGGAGTT GCTGAAAACA GGAACGGTTG CGTGGTGCTC
ACCGATTCCA TCAAGGATTT TTGGGATGAG GCCGATCCAA GAAAAATATC GGAGTCTTTT
TGCGCCCCCT TGAAAGGAGA AGTCCTGCCC TTGGAGTGCT TCAATATTCC TGAAGAATAT
ATTGCTCATG TGCAGGATCT TTTGCAGCAA CCAGGCGACA GTCCCGTCCA CATACTCCTT
TACGGTGCTC CAGGGACAGG CAAAACCACT TTCGCGCGCA GTCTCGCCGC CGCTTCTGGG
CTTTCTGCGT GGGCAGTGAA CGCTCCGCAA AATGCAGACC ACGACCGACG GGCTCAACTC
ATGGCGGGAG TTGGCGTCGT TTCACGGCAT GAAAAAGCTT TCTTGCTGGT GGATGAAGCC
GAGCGGCTTC TTGATTGTGA CATGTTTGCT GCTTTCAGGC AGAATACAAC GGATAAGGCC
TGGTTGAACA GTTTTATGGA AAAGCCCGGC CAGCGCATCA TCTGGATAAC GAACCACGTG
CACCATCTGG AAGAGGCGGT ACTTCGACGC TTCCATTTTA GCATCCAGTT TGAACCGCTG
GGACGAAAAG AACGTATCCG TATGTGGCGA CAGATACTGG AGCGTTATGG GGTGCTGAAC
CGAGTTGATG AGAGTTCCCT TAAGGAGTTG GCGCGGACCT ACGATGTTCC GGCATCGGTC
ATCGAGATGG CCGTCGACCA GGCGAAGAGC TTGTGTAAGC GCAAGCAAAA GGGCTTTGTC
CAAGCTCTTA AGCGGGTTGT AGCGTCCTAT GCACTTTTGA AAGCAGGTGG AGAAAAGCCG
CGCAGGAAGA AAACCGTGGC TTCAAATTAT GACCCTAAAG GCGTAACGCT GGAAGGCTCA
GTCCAAGAAC TCGAAAAGAA GCTCGTGCGA GGAGATTCGC TGCTGCGCCG GGGAGAGGAT
ATTGGCGCGG GAGCGTTTAC AATGCTGTTT TACGGGCCTC CAGGAACTGG CAAAACCGCC
CTTGCCAGAT ACCTGGCTGA CAAGCTCGAC CGTGAGTGCA TGGTGGTCCG CGCCAGCGAT
CTCCTGGCTC CATATGTGGG CATGACCGAG AGGCTTATTG CCAAAGCTTT TGCTGACGCT
GAGCGAGAGG GCGCGGTGCT TGTCATCGAT GAAGCCGACA GTTTCCTGTT CTCGCGCGAT
ATGGCGACAC ACTCCTGGGA AACCACGCAA GTCAATGAAT TCCTGACCGC ACTTGAGGAG
TGCCGGGGTA TTTGCGTCTG CACGACGAAC AGACGGGATC TGATGGATCC GGCTGTAATG
CGCAGGTTCA GCCATAAGGT CAGTTTTGGT TATGCCAAGT TTGAGCAGGC GAAAGCGCTG
TATTCGTCGA TGCTCGCTCC AATGGTTGGG ACAACGCTAC CGGCCACTCT CGAGGCCAGC
CTCGCACTCA TGAAGAAGCT TACCCCTGGA GATTTTCATG CTGTTCGAGC CCAGATGCGT
CATGCGGAGG AGACCGTGAC CCACGAGGAT CTCATCCGCG CTTTGAAGCG GGAGCAGGAG
TTGAAGCTAG ACTCCCAGGG AGGAGGAATG GGGTTCATAT AG
 
Protein sequence
MNRAFRSVER YFEDDLKVFG FGATDFMAHM LGMSTSKCRQ IIQQLINLGV AENRNGCVVL 
TDSIKDFWDE ADPRKISESF CAPLKGEVLP LECFNIPEEY IAHVQDLLQQ PGDSPVHILL
YGAPGTGKTT FARSLAAASG LSAWAVNAPQ NADHDRRAQL MAGVGVVSRH EKAFLLVDEA
ERLLDCDMFA AFRQNTTDKA WLNSFMEKPG QRIIWITNHV HHLEEAVLRR FHFSIQFEPL
GRKERIRMWR QILERYGVLN RVDESSLKEL ARTYDVPASV IEMAVDQAKS LCKRKQKGFV
QALKRVVASY ALLKAGGEKP RRKKTVASNY DPKGVTLEGS VQELEKKLVR GDSLLRRGED
IGAGAFTMLF YGPPGTGKTA LARYLADKLD RECMVVRASD LLAPYVGMTE RLIAKAFADA
EREGAVLVID EADSFLFSRD MATHSWETTQ VNEFLTALEE CRGICVCTTN RRDLMDPAVM
RRFSHKVSFG YAKFEQAKAL YSSMLAPMVG TTLPATLEAS LALMKKLTPG DFHAVRAQMR
HAEETVTHED LIRALKREQE LKLDSQGGGM GFI