| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1226 |
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| Symbol | |
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| ID | 8376890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1354568 |
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| End bp | 1355596 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645000458 |
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| Product | sigma54 specific transcriptional activator, PspF, Fis family |
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| Protein accession | YP_003157745 |
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| Protein GI | 256829017 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.305483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA CATATTCGTC GTCGCCCAGG GAAGCCATTG GCCAGTCCGA GGCATTTTTG
CATTTTCAGG AGCAGCTTTC CCGCGTGGCG CGGGTAGACA GGCCGGTGCT CATTATCGGC
GAGCGCGGTA CCGGCAAGGA GCTGGCCGCC GCGCGCCTGC ATTATCTTTC GCAGCGCTGG
CAGGGGCCGC TGGTCACGCT CAACTGCGCG GCCCTGGCCG GATCGCTTCT GGATGCGGAA
CTCTTCGGGC ACGAGGTCGG GGCGTTCACC GGCGCCACGG TCCGCCGCAA AGGGCGCTTC
GAGAACGCGG ACACCGGCAC CCTGTTTCTG GACGAGATCG CGAACCTCTC GCCAGAGGCG
CAGGAAAAGA TACTGCGCGT GGTCGAATAC GGATCCTTCG ACCGGGTCGG AGGGAGCCGG
CCGGTGACGG TCAACGTGCG CATCGTGGGC GCGACCAATG TGGATCTTCC GCAGCGGGCC
AAGCTTGGCG CTTTCAAGGA GGATTTGCTG GATCGCCTGA GCTTCGAGGT GCTGACCGTG
CCGCCGCTGC GCATGCGCGA AGGGGACGTG CAGGTGCTGA CCCGGCATTT CGCCGCTCGC
ATGGCCATAG GCATGGGTTA TCCCGAATCG CCGGAGTTTT CCGCGCGGGC CATGGCCATG
CTCACGTCCC ACCCTTGGCC GGGCAATGTG CGCGAGCTCA AGAACGTGGT CGAGCGAGCC
GTGTATCGGA CCGGTCCGGG AACCATCAGG GAGGTGGTTT TTGATCCGTT CTCGTCTCCG
TATCGCCCGG TGGAGCGGGC CGAACCCTCA GCACCGACGC TAACGGCAAG GGATGATGTT
CGGCGCTCCG CGAAGCCGAA TCTGGGCATT CCGCTGTCAA GGGCCGTGCG CGAGCTGGAA
GAGGCATATC TGGCGGCGGC TCTGGATCAA AGCCGCCACA ACCAAAAACG GGCTGCAGAT
CTGCTGGGAC TGACCTACCA TCAGTTCCGC GGGCTGTACC GCAGGCTTGG CGCGGACCGG
GAAGACTGA
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| Protein sequence | METTYSSSPR EAIGQSEAFL HFQEQLSRVA RVDRPVLIIG ERGTGKELAA ARLHYLSQRW
QGPLVTLNCA ALAGSLLDAE LFGHEVGAFT GATVRRKGRF ENADTGTLFL DEIANLSPEA
QEKILRVVEY GSFDRVGGSR PVTVNVRIVG ATNVDLPQRA KLGAFKEDLL DRLSFEVLTV
PPLRMREGDV QVLTRHFAAR MAIGMGYPES PEFSARAMAM LTSHPWPGNV RELKNVVERA
VYRTGPGTIR EVVFDPFSSP YRPVERAEPS APTLTARDDV RRSAKPNLGI PLSRAVRELE
EAYLAAALDQ SRHNQKRAAD LLGLTYHQFR GLYRRLGADR ED
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