Gene Dbac_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1190 
Symbol 
ID8376854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1310109 
End bp1311368 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID645000423 
Productmembrane protein 
Protein accessionYP_003157710 
Protein GI256828982 
COG category[S] Function unknown 
COG ID[COG4325] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGATC GCTTGAGTTT CGTCGTCCGG CATTTCCGCG AGCGGTTGTG GGTCAAGCCG 
CTCATCGTTT GTGTCCTGTC CATTGGCGCA GTTTTCCTTG CCAATCTCGT GGACATGGCC
GAACTTGGCC GGTTGCTGCC GAAGATCACG CAGGAATCGA TCGAAACCTT GCTCAAGATC
ATGGCGTCGA GCATGTTGAT GATGGCCACC TTCGCCGTGG CCTCGATGGT GGCCGCTTAT
GCGTCGGCCA GCAGCGCCGC GACGCCCCGT TCTTTTCCGC TGATGATCGC CGATGATGTT
TCGCAGAATG CGCTCTCGGT GTTTGTCGGC GCGTTTATCT ACAGTGTGGT CGCGCTGGTT
GCGCTGATGA ACGGGTTTTA TGTTGGAAGG GGCAGTCAGT TCATCCTGTT CTCCCTGACC
ATAGTTGTGT TTGTAATCAT CATTATCACC TTCATCAGGT GGGTCGATAA CATCGCCCGG
CTCGGCCGGC TGGGACATAC GATCACCAAG GTGGAGCAGG CGGCCGCTAA GGCGATTCGG
AAGCGACATT CAGCGCCACG CCTTGGGGGC GTCGCGGCGT TCAGCCCTCC GGATGGCAGC
CGGGCGGTCT TCGGAGCCAT CGGTTACGTC CAGCATGTCG ACACCGCCGC GTTGCAAAAA
CGGGCGGAGG CGTCGCGGCT GAGAATTGTC GTGGCAGCGT TGCCCGGCAC CTTTTGCGCG
CCAAACCGCC CTATCGCCTG GGTCATGCGG GAGGAGCCGG GCAATGTGTC CGACGAGGAC
GCCGAAGCAA CCGCGGCCGC GTTCGTGATT GGCGACTCCA GGGTCTTTGA GCAGGATCCG
CGGTTCGGAC TGCTGGTCCT GTCGGAAATC GCCAGCCGCG CGCTTTCGCC TGCGGTCAAT
GATCCGGGGA CCGCCATCTG CGTCACGGGC ACATTTGTCC GCCTGTTCGT AATGTGGAAC
GAGCGCGGCG AGGCGGATGA CGATTCCACG GTGCTGTTCG ACCGCGTCGC GGTGCCGGAA
TTGTCCATGG CGGACATGTT CGACGACGCT TTTACCGGGA TCGCCCGAGA CGGAGCGGGC
AATGTCGAAG TGGTCGTGCG GCTGCTCAAG GCCCTCGATT CGCTTGCCGT TGTCGGGGAC
GCGGCGATGC GCGACAACGC GCTGCGGCAC GCCCGTCTCG CGGTGGTCCG CGCCGAGAAT
GCAATGCAGA TTCCCGACGA TCTCAGAGTC ATACGGGAGG TGGCCAGGTT TGCAGCGTGA
 
Protein sequence
MWDRLSFVVR HFRERLWVKP LIVCVLSIGA VFLANLVDMA ELGRLLPKIT QESIETLLKI 
MASSMLMMAT FAVASMVAAY ASASSAATPR SFPLMIADDV SQNALSVFVG AFIYSVVALV
ALMNGFYVGR GSQFILFSLT IVVFVIIIIT FIRWVDNIAR LGRLGHTITK VEQAAAKAIR
KRHSAPRLGG VAAFSPPDGS RAVFGAIGYV QHVDTAALQK RAEASRLRIV VAALPGTFCA
PNRPIAWVMR EEPGNVSDED AEATAAAFVI GDSRVFEQDP RFGLLVLSEI ASRALSPAVN
DPGTAICVTG TFVRLFVMWN ERGEADDDST VLFDRVAVPE LSMADMFDDA FTGIARDGAG
NVEVVVRLLK ALDSLAVVGD AAMRDNALRH ARLAVVRAEN AMQIPDDLRV IREVARFAA