Gene Dbac_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1158 
Symbol 
ID8376822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1270959 
End bp1271582 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID645000391 
Productcell wall hydrolase SleB 
Protein accessionYP_003157678 
Protein GI256828950 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCA ACACATGGCT CGCGATCTGC CTTGCAACAA TCCTGCTCAT GGGTCCTTGC 
CCGTTATGGG GCCAATCGCA GCAGGCGGAA TCCGCGGAAG TCAAAGCGAA GGTGCTGGAG 
CAAAGCGCAG CGTCCGAGGG CAATGCTACG CGTCCCTCTC CGTCCGATGC CATTACTAAA 
CCTGAAGCGC AGGCGGTGGA CCCGTCCGGG GAAAATCCTC TGGACGACGC GCTGACCTGC 
CTTGCGCGCA CCATCTATTG GGAGGCCCGG GGCGAAGAGG CTGCGGGTAT CGAAGCCATA 
GCCAATGTCG TCATGAACCG CCTTGGCCAT GAAGGCTTTC CGGAAACTAT CTGCGAAGTT 
GTCAAGCAAG GCCTGGAACA AGGCGCCTGT CAGTTCTCAT GGTGGTGCGA TGGCCTCCCC 
GATGACGCGC AGGAGGAAGA AGCCTACTCT GCGGCCAAGG AAATAGCCCG GAAAGCCCTT 
AACAAACAAG TGCAGGACAG AACCGGCGGA GCCTTATATT TTCACCGGAA AGACCTTACG 
CCGCAATGGG CTGCAGAATA CGTGAAGACG GTCGTTATCG GGGAACATGT ATTCTACAAG 
CCTGAGGGCG GTGCGGCAAA GTAG
 
Protein sequence
MIRNTWLAIC LATILLMGPC PLWGQSQQAE SAEVKAKVLE QSAASEGNAT RPSPSDAITK 
PEAQAVDPSG ENPLDDALTC LARTIYWEAR GEEAAGIEAI ANVVMNRLGH EGFPETICEV 
VKQGLEQGAC QFSWWCDGLP DDAQEEEAYS AAKEIARKAL NKQVQDRTGG ALYFHRKDLT 
PQWAAEYVKT VVIGEHVFYK PEGGAAK