Gene Dbac_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1094 
Symbol 
ID8376756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1202022 
End bp1203209 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content58% 
IMG OID645000329 
Productbeta-lactamase domain protein 
Protein accessionYP_003157617 
Protein GI256828889 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0366496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGT CAGCGCGAAT TTTATGGAAC CTGCTCGTGG TCATCAGCTT GTTCTTGATC 
CCTGCTTATG CATCGAAAAC GGCAGAGCCA CTTGTGTCAG CAAGCGGCGA ACCCCACATG
TTGGCAATAA TTGATGCGTT AACGAAACTT GCCTACGAGG GCGGGACGAT GCCCCTTACA
ACCACGCCGG TAGTTGGAAA GCCTGAGCGG CAGTACCAAT CCGTCTTCAT GCCGGGGACG
GAAACGCTGG ACGCCGGCGA GATGAGGGTG ACCATCCTCG GCAGTGGAGA CCCCTTCGTC
AAGAAGGGCC AGTCATCGGC CTCCGTGCTC ATCGAAGTGG GAAATGCGGA GCGCGACTTC
TTCTTTTTCG ATCTTGGGTC AGGCTCACTG GCCAATTTCA ACGGGCTCAA ACTCCCCGTG
ACCGCGACAA CGAAAGTGTT CCTGACACAT CTTCATGCGG ATCATGTCGG CGACATGCCG
ACCCTTGTCT GGAGTCTTGC CAAGGCCGGG AGATCCGTTC CCGTCGAGGT CTGGGGTCCC
TCCGGCGCGA CCAGGGAGCT TGGCACCCTC GCATATGCAG AGCACCTGCT GGCGGCCCAT
GCCTGGGATA CGGCCTCCTT GAGCGAACAT CCTTCCGGAC GATCCGGCGC GCGCATGATC
GCAACAGAAT TTCCGCATGA CACGCCGACA GTAGTTTACG AGCGCAACGG CGTAACCATC
TCGTCTTTCC CCGTGAAGCA CATTCTGCCC GGCCCCGTCG GGTATCGCAT CGATTACCAG
GGACGCTCGG TGGTCTTCAC CGGTGACACG ATGCCCACCG AGACCACCTT GGAGGCATGC
AAGGGCGGCG TGGATCTTCT CATCCACGAG TCCTTTCCCT CGGCCTCGGT TTTCGCGAAA
AAAGCCAATA TCCCGTTGGA GCAAGCGGAG ATAGTCGTCA ACCATTCGCA CACCAGTCCC
GTCACGGCCG CAAAGGTTTT CAAGGAAGCG GGTGCCCGCA TGTCGGCGAT ATGGCACCTC
GTCGTAGACC ATGACACGGT GGGACCGGCA TATCAGGAAA TTCGCAGTCA ATTCGACGGC
CCTGTAACCA TCGCGCAGGA TCTCACCGTC TTCAACATCA CGCAGCAGGC TGTCGTCACT
CGCCAGGCGA TCATCGACCC GGTCGCCTGG CCAGTTCTTG GCAAGTAA
 
Protein sequence
MRKSARILWN LLVVISLFLI PAYASKTAEP LVSASGEPHM LAIIDALTKL AYEGGTMPLT 
TTPVVGKPER QYQSVFMPGT ETLDAGEMRV TILGSGDPFV KKGQSSASVL IEVGNAERDF
FFFDLGSGSL ANFNGLKLPV TATTKVFLTH LHADHVGDMP TLVWSLAKAG RSVPVEVWGP
SGATRELGTL AYAEHLLAAH AWDTASLSEH PSGRSGARMI ATEFPHDTPT VVYERNGVTI
SSFPVKHILP GPVGYRIDYQ GRSVVFTGDT MPTETTLEAC KGGVDLLIHE SFPSASVFAK
KANIPLEQAE IVVNHSHTSP VTAAKVFKEA GARMSAIWHL VVDHDTVGPA YQEIRSQFDG
PVTIAQDLTV FNITQQAVVT RQAIIDPVAW PVLGK