Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1051 |
Symbol | |
ID | 8376712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1148344 |
End bp | 1150932 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645000291 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_003157580 |
Protein GI | 256828852 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTGA ACGAGGCCTC TGAGGGAGCA TTTATACCCG AGAATCCGCG CATGCTCGAA AAACTTCGGG AGCGGCAGCT GGAATTTCTC GTCACCAACT CGCGGGTTTC CATAGCTGCG AACGTGTTCA ACGGGAGCCT CTTCCTGGCA TTTCTCTACG GCCATCTGCC GACCTTCGAG CTCTTGTTGT GGTATGGCGC CCTCGTTCTT TTCTCCGTTC CGCGTCTGCT CGTCGTGTTC TTCTTCCACC GGCTGCGTGC GCGGCTGTCC GTGGTGCAAT GGTCGCGGGT TCTGGCCCTT GGCACCTTGT GCTCCGGGAT CATCTGGGGG CTGTCGGCTC CCCTGTTTTT CGCCAAGCTC CCCCCTCTGG GACAGGCTTT CCACATCCTC CTCGTAGGGG GGACGCTGAC GGGTGCGGCC GTCTACCTCG CCCACCTGCT GCCCAACTTT GTGCTCTTCG CCATCCCCCA GGCGCTGCCC ATGCAGATCA TTCTGATGAC CCAGGCCGGA GATCCGTTCT TCCGGGGCAT GGCCCTGCTA TTCTTCATTT TCACCGCCAT GATGTTCATC ATGGCCTTCA GGACCAACCG CCAGTTCGCC AGGTACACCC TGCTGCAGCT GCGCAACGAC GCGCTCATGG AGAAGCTCAA CGAGAGCGAA TACCTTTTCC GGACGCTGAC GGAACATTCC TCCATGGGCG TGCTGCTCCT CGACGACGGG CGAGTTCTCT ACGCCAACCC GGCCGTCGAG GCAGCAACCG GATACGGGCT CGACGAGCTC ATGGGCATGA TGATCCGGGA GATCGTCGAC CCCGAGCATC GCGGCGTAGT CGACCAGAGT ACTCCGGGCT CCGTAGGGCA AGCCATCGGG CGGTCCGAGT TCAGAATTCG CCGCAAGGAC GGCACCGTGC GCTGGGTCGA GTATGTTCCG GCCCTGGTGG AGTTCCAGGG CCGCAAGGTC GTCCTCGGGG CCTGCGCGGA CATCACTGAC AGGATGCTGG TGCGTCAGGC CCGGCAGGAG AACGAGGAGC GCTACAGGGT GCTGTTCGAG ACCGCCAGTG ACGCCATGTA CGTGGTGGGC CTTGATCCGG AGGGTCGGCT CGACCTCTTC CGCGACGCCA ACGTCCAGGG CTGCGCTGCC CTGGGCTATT CCCTGGAGGA ACTGCTGCGT CTGGGACCCA GGGACATGAC TCATCTCTAC GAGCTCAAGC ACGCCGGCGA GCTGCAGCGG CGGCTGCGCA GCGACGGCTG CGCCGTGTAC GATGCCCGCC ATGTCTCGCG TGACGGACGG TTCTTCCCCG TGGAGGTCAG CGCCAAGCTC TTCAGCCACG AAGGGAAGCA GGCCGTGCTG TGCATTGCCC GCGACATCAG CGAACGCAAG GAGGCCGAGC TCCGGCTTGA AGCCGCCAAG AAGCAGGCCG AGGTGGCCAA TCAGGCCAAG AGCGAGTTTC TGGCCAACAT GAGCCACGAG ATCCGCACCC CGCTGAATGG TCTGCTGGGC ATGCTGCAGC TCGTGCGCAT GGGCGACCTG GACGCCGAGC GCAGCCAGTA CCTCGATGTG GCCATGAATT CGGGCGAAGG TTTGCTGGCA GTCATTAACG ACATTCTCGA CCTGTCAAAA ATCGAGTCCG GGAAGTTTGA ACTCGCGCCT GTGGATTTCA ACGTGCACGC CCTAGTCCAG AGCGTCGGCG AGACCTTCCG CTTCCCTGCC CGCAGCAAGG GGGTGGAGCT GATCGTCGAG ACCGATGCGG ACATGCCCGT GTTCATCCAT GCGGATCAGG TGCGGATTCG CCAGATCCTC TACAACCTCG TGGGCAACGC AGTGAAATTC ACGCTCGCGG GGGAGATACG CATCAGCCTT TCGATGCCAT TCCAGACGGG CAACAGGGGG CAGATGGAAA TTCGTGTGGC CGACACTGGA GTGGGCATTC CGCTGGACCA GCAGGCAGCG CTCTTCGAGC CCTTCGTCCA GGCCTCCACG GCGCCCAAGA CCCGTGGTTC GGGCACGGGA CTGGGACTGT CCATCGTCAA GCGCATCGTC GGGTTCATGG GCGGCAGGGT CCGCCTCGAC AGTACTCCCG GGGAGGGGAC CACGTTGACG GTGAGCGTGA AAGTCGGGAT CTGCTCGCAG GCGCCGACGG AGGAGCTGCC TTGCGCCTTC GAGCAGACCT GTTGCCCCGT GGCCGGATCC GGGTTGCGAA TTCTGGTGGC CGAGGACAAC AGCGTCAACC AGCTCATGAT CGTCAAGCTC CTGGAGAAGC TCGGCCATAC AGCCGTCTGC GCCCATGACG GGCAAGAAGC CCTGGAACTC CTGAGCCTTG CGCCCTACGA CTGCGTCCTC ATGGACATCC AGATGCCCGG CCTGGACGGT ACCGAGGCCA CGCGCATGAT CCGCCGCAGG GCTTTGTCCG GCATCGACCC GGACGTCCCC ATCATCGCCC TGACCGCCTA CGCCCTGTCC GGTGACCGGG AGCGTTTTCT GGCCATGGGC ATGAGCGGAT ATCTCTCCAA GCCGGTCTCC ATGGCCGGCC TGTCCGCCGC ACTGAGCGGC ATCGTTCCGC TCGCCCGTGA GAGGGTCACG GTCTCCTGA
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Protein sequence | MILNEASEGA FIPENPRMLE KLRERQLEFL VTNSRVSIAA NVFNGSLFLA FLYGHLPTFE LLLWYGALVL FSVPRLLVVF FFHRLRARLS VVQWSRVLAL GTLCSGIIWG LSAPLFFAKL PPLGQAFHIL LVGGTLTGAA VYLAHLLPNF VLFAIPQALP MQIILMTQAG DPFFRGMALL FFIFTAMMFI MAFRTNRQFA RYTLLQLRND ALMEKLNESE YLFRTLTEHS SMGVLLLDDG RVLYANPAVE AATGYGLDEL MGMMIREIVD PEHRGVVDQS TPGSVGQAIG RSEFRIRRKD GTVRWVEYVP ALVEFQGRKV VLGACADITD RMLVRQARQE NEERYRVLFE TASDAMYVVG LDPEGRLDLF RDANVQGCAA LGYSLEELLR LGPRDMTHLY ELKHAGELQR RLRSDGCAVY DARHVSRDGR FFPVEVSAKL FSHEGKQAVL CIARDISERK EAELRLEAAK KQAEVANQAK SEFLANMSHE IRTPLNGLLG MLQLVRMGDL DAERSQYLDV AMNSGEGLLA VINDILDLSK IESGKFELAP VDFNVHALVQ SVGETFRFPA RSKGVELIVE TDADMPVFIH ADQVRIRQIL YNLVGNAVKF TLAGEIRISL SMPFQTGNRG QMEIRVADTG VGIPLDQQAA LFEPFVQAST APKTRGSGTG LGLSIVKRIV GFMGGRVRLD STPGEGTTLT VSVKVGICSQ APTEELPCAF EQTCCPVAGS GLRILVAEDN SVNQLMIVKL LEKLGHTAVC AHDGQEALEL LSLAPYDCVL MDIQMPGLDG TEATRMIRRR ALSGIDPDVP IIALTAYALS GDRERFLAMG MSGYLSKPVS MAGLSAALSG IVPLARERVT VS
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