Gene Dbac_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1051 
Symbol 
ID8376712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1148344 
End bp1150932 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content63% 
IMG OID645000291 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_003157580 
Protein GI256828852 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGA ACGAGGCCTC TGAGGGAGCA TTTATACCCG AGAATCCGCG CATGCTCGAA 
AAACTTCGGG AGCGGCAGCT GGAATTTCTC GTCACCAACT CGCGGGTTTC CATAGCTGCG
AACGTGTTCA ACGGGAGCCT CTTCCTGGCA TTTCTCTACG GCCATCTGCC GACCTTCGAG
CTCTTGTTGT GGTATGGCGC CCTCGTTCTT TTCTCCGTTC CGCGTCTGCT CGTCGTGTTC
TTCTTCCACC GGCTGCGTGC GCGGCTGTCC GTGGTGCAAT GGTCGCGGGT TCTGGCCCTT
GGCACCTTGT GCTCCGGGAT CATCTGGGGG CTGTCGGCTC CCCTGTTTTT CGCCAAGCTC
CCCCCTCTGG GACAGGCTTT CCACATCCTC CTCGTAGGGG GGACGCTGAC GGGTGCGGCC
GTCTACCTCG CCCACCTGCT GCCCAACTTT GTGCTCTTCG CCATCCCCCA GGCGCTGCCC
ATGCAGATCA TTCTGATGAC CCAGGCCGGA GATCCGTTCT TCCGGGGCAT GGCCCTGCTA
TTCTTCATTT TCACCGCCAT GATGTTCATC ATGGCCTTCA GGACCAACCG CCAGTTCGCC
AGGTACACCC TGCTGCAGCT GCGCAACGAC GCGCTCATGG AGAAGCTCAA CGAGAGCGAA
TACCTTTTCC GGACGCTGAC GGAACATTCC TCCATGGGCG TGCTGCTCCT CGACGACGGG
CGAGTTCTCT ACGCCAACCC GGCCGTCGAG GCAGCAACCG GATACGGGCT CGACGAGCTC
ATGGGCATGA TGATCCGGGA GATCGTCGAC CCCGAGCATC GCGGCGTAGT CGACCAGAGT
ACTCCGGGCT CCGTAGGGCA AGCCATCGGG CGGTCCGAGT TCAGAATTCG CCGCAAGGAC
GGCACCGTGC GCTGGGTCGA GTATGTTCCG GCCCTGGTGG AGTTCCAGGG CCGCAAGGTC
GTCCTCGGGG CCTGCGCGGA CATCACTGAC AGGATGCTGG TGCGTCAGGC CCGGCAGGAG
AACGAGGAGC GCTACAGGGT GCTGTTCGAG ACCGCCAGTG ACGCCATGTA CGTGGTGGGC
CTTGATCCGG AGGGTCGGCT CGACCTCTTC CGCGACGCCA ACGTCCAGGG CTGCGCTGCC
CTGGGCTATT CCCTGGAGGA ACTGCTGCGT CTGGGACCCA GGGACATGAC TCATCTCTAC
GAGCTCAAGC ACGCCGGCGA GCTGCAGCGG CGGCTGCGCA GCGACGGCTG CGCCGTGTAC
GATGCCCGCC ATGTCTCGCG TGACGGACGG TTCTTCCCCG TGGAGGTCAG CGCCAAGCTC
TTCAGCCACG AAGGGAAGCA GGCCGTGCTG TGCATTGCCC GCGACATCAG CGAACGCAAG
GAGGCCGAGC TCCGGCTTGA AGCCGCCAAG AAGCAGGCCG AGGTGGCCAA TCAGGCCAAG
AGCGAGTTTC TGGCCAACAT GAGCCACGAG ATCCGCACCC CGCTGAATGG TCTGCTGGGC
ATGCTGCAGC TCGTGCGCAT GGGCGACCTG GACGCCGAGC GCAGCCAGTA CCTCGATGTG
GCCATGAATT CGGGCGAAGG TTTGCTGGCA GTCATTAACG ACATTCTCGA CCTGTCAAAA
ATCGAGTCCG GGAAGTTTGA ACTCGCGCCT GTGGATTTCA ACGTGCACGC CCTAGTCCAG
AGCGTCGGCG AGACCTTCCG CTTCCCTGCC CGCAGCAAGG GGGTGGAGCT GATCGTCGAG
ACCGATGCGG ACATGCCCGT GTTCATCCAT GCGGATCAGG TGCGGATTCG CCAGATCCTC
TACAACCTCG TGGGCAACGC AGTGAAATTC ACGCTCGCGG GGGAGATACG CATCAGCCTT
TCGATGCCAT TCCAGACGGG CAACAGGGGG CAGATGGAAA TTCGTGTGGC CGACACTGGA
GTGGGCATTC CGCTGGACCA GCAGGCAGCG CTCTTCGAGC CCTTCGTCCA GGCCTCCACG
GCGCCCAAGA CCCGTGGTTC GGGCACGGGA CTGGGACTGT CCATCGTCAA GCGCATCGTC
GGGTTCATGG GCGGCAGGGT CCGCCTCGAC AGTACTCCCG GGGAGGGGAC CACGTTGACG
GTGAGCGTGA AAGTCGGGAT CTGCTCGCAG GCGCCGACGG AGGAGCTGCC TTGCGCCTTC
GAGCAGACCT GTTGCCCCGT GGCCGGATCC GGGTTGCGAA TTCTGGTGGC CGAGGACAAC
AGCGTCAACC AGCTCATGAT CGTCAAGCTC CTGGAGAAGC TCGGCCATAC AGCCGTCTGC
GCCCATGACG GGCAAGAAGC CCTGGAACTC CTGAGCCTTG CGCCCTACGA CTGCGTCCTC
ATGGACATCC AGATGCCCGG CCTGGACGGT ACCGAGGCCA CGCGCATGAT CCGCCGCAGG
GCTTTGTCCG GCATCGACCC GGACGTCCCC ATCATCGCCC TGACCGCCTA CGCCCTGTCC
GGTGACCGGG AGCGTTTTCT GGCCATGGGC ATGAGCGGAT ATCTCTCCAA GCCGGTCTCC
ATGGCCGGCC TGTCCGCCGC ACTGAGCGGC ATCGTTCCGC TCGCCCGTGA GAGGGTCACG
GTCTCCTGA
 
Protein sequence
MILNEASEGA FIPENPRMLE KLRERQLEFL VTNSRVSIAA NVFNGSLFLA FLYGHLPTFE 
LLLWYGALVL FSVPRLLVVF FFHRLRARLS VVQWSRVLAL GTLCSGIIWG LSAPLFFAKL
PPLGQAFHIL LVGGTLTGAA VYLAHLLPNF VLFAIPQALP MQIILMTQAG DPFFRGMALL
FFIFTAMMFI MAFRTNRQFA RYTLLQLRND ALMEKLNESE YLFRTLTEHS SMGVLLLDDG
RVLYANPAVE AATGYGLDEL MGMMIREIVD PEHRGVVDQS TPGSVGQAIG RSEFRIRRKD
GTVRWVEYVP ALVEFQGRKV VLGACADITD RMLVRQARQE NEERYRVLFE TASDAMYVVG
LDPEGRLDLF RDANVQGCAA LGYSLEELLR LGPRDMTHLY ELKHAGELQR RLRSDGCAVY
DARHVSRDGR FFPVEVSAKL FSHEGKQAVL CIARDISERK EAELRLEAAK KQAEVANQAK
SEFLANMSHE IRTPLNGLLG MLQLVRMGDL DAERSQYLDV AMNSGEGLLA VINDILDLSK
IESGKFELAP VDFNVHALVQ SVGETFRFPA RSKGVELIVE TDADMPVFIH ADQVRIRQIL
YNLVGNAVKF TLAGEIRISL SMPFQTGNRG QMEIRVADTG VGIPLDQQAA LFEPFVQAST
APKTRGSGTG LGLSIVKRIV GFMGGRVRLD STPGEGTTLT VSVKVGICSQ APTEELPCAF
EQTCCPVAGS GLRILVAEDN SVNQLMIVKL LEKLGHTAVC AHDGQEALEL LSLAPYDCVL
MDIQMPGLDG TEATRMIRRR ALSGIDPDVP IIALTAYALS GDRERFLAMG MSGYLSKPVS
MAGLSAALSG IVPLARERVT VS