| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0924 |
|---|
| Symbol | |
|---|
| ID | 8376582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1007089 |
|---|
| End bp | 1008438 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645000163 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003157455 |
|---|
| Protein GI | 256828727 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.200497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG AGTTGAACAA GAAATACGGG CTTTTTACCG CCATCGCCAT GGTCGTGGGC
ATCGTCATCG GCAGCGGCGT CTTCTTCAAG GCGGAAAAAA TTCTCACCGC CACCGGGGGC
AATCTGCCGC TGGGGATTCT GGCCTGGATC ATCGGCGGGT TCATCATGAT CTCCTGCGCC
TACACATTTT CGCTCATGGC TACTAAATAC GAGCGCGTGA ACGGCATCGT CGACTACGCC
GAAGCCGCCA TGGGCAAGAA ATACGGTTAT TATGTCGGCT GGTTCATGGC GCTCATCTAT
TACCCGACCC TGACCTCGGT TTTGGCCTGG GTCTCGGCCA GGTATACGGC CGTGCTGTTC
GGGTGGGACA TCACCGGAGG CGAGTGCATG ACCATTTCCG GTTTCTTCCT GGTGGCGAGC
TATGCCTTGA ACGCCCTGTC GCCAGTGCTG GCCGGAAAAT TCCAGGTCAC GACGACCGTG
GTCAAGCTGA TCCCGCTTTT GCTCATGGCT GTGGTCGGCA CGGTGTTCGG CTTGGACAAC
GGCATGATCG TGCAGAATTT TACCACCTCC GTCACGGAAG TCGATCCGCT CATTGCCGTG
TTCACCGCCG TCGTGGCCAC GTCTTTCGCA TACGAGGGAT GGATCATTGC CACCAGCATC
AACGCGGAAC TCAAAGACTC CAAGAGGAAT CTTCCCCTGG CTTTGATGGT GGGCACCTTC
ACGGTCATGG TCGTTTATAT ATTATACTAC GTCGGCCTGG CAGGGGCGGT CACCAATCAG
ACCCTGATGG AAGGCGGTCA GGAAGGGGCG AAGCTGGCTT TCGAGACCGT CTTTTCAAGC
CTGGGCGGAA CGCTCATCTT CGTTTTTGTC ATCATCTCCT GCCTAGGCAC CCTGAATGGC
CTGATGCTCG GATGCACGCG CGGCATCTAT TCCATCTCCG CCAGAAACCA GGGTCCCAAC
CCGTTCATGT TCAAACAGAT CGACAATGCG ACCAACATGC CCACGAACTC CGCCGTTCTG
GGCCTCCTGT TGTCCGCGTT CTGGCTGGTG TATTTTTACG GGGCGAATCT CACCACACCG
TGGTTCGGCT TTTTCTGCTT CGACCCTTCG GAACTGCCCA TCGTGACGAT CTATGCCCTG
TATATCCCCA TTTTCGTGGT CTTCATGAAA AAGGAATCCG ACTTTTCGGT ATTCAAACGC
TACATCATGC CCTCTTTGGC CATATTCGGC AGCCTGTTCA TGATGTTTGC CGCCTGCTTT
TCGCACGGCA TGGCCGTTGT GGCGTATCTT GCCATCTTTG GAGTGGTGAT GCTGGGCGGG
GTGTTCTTTT CGCGGGAGCG CGAGTTGTAG
|
|---|
| Protein sequence | MSMELNKKYG LFTAIAMVVG IVIGSGVFFK AEKILTATGG NLPLGILAWI IGGFIMISCA
YTFSLMATKY ERVNGIVDYA EAAMGKKYGY YVGWFMALIY YPTLTSVLAW VSARYTAVLF
GWDITGGECM TISGFFLVAS YALNALSPVL AGKFQVTTTV VKLIPLLLMA VVGTVFGLDN
GMIVQNFTTS VTEVDPLIAV FTAVVATSFA YEGWIIATSI NAELKDSKRN LPLALMVGTF
TVMVVYILYY VGLAGAVTNQ TLMEGGQEGA KLAFETVFSS LGGTLIFVFV IISCLGTLNG
LMLGCTRGIY SISARNQGPN PFMFKQIDNA TNMPTNSAVL GLLLSAFWLV YFYGANLTTP
WFGFFCFDPS ELPIVTIYAL YIPIFVVFMK KESDFSVFKR YIMPSLAIFG SLFMMFAACF
SHGMAVVAYL AIFGVVMLGG VFFSREREL
|
|---|
| |