Gene Dbac_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0879 
Symbol 
ID8376534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp960477 
End bp961658 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID645000118 
ProductPhosphoglycerate kinase 
Protein accessionYP_003157413 
Protein GI256828685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.436803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTT TAGATGAATT GAACGTAAGC GGCAAACGGG TTCTCATGCG CGTCGACTAC 
AACGTGCCCC TCAAAGGAGA TGCCATTGTC GACGACAACC GCATCAAGCA GAGTTTACCG
ACTCTTAATC TGGCCCTGGA TAATGGCGCG TCTTTGGTGA TTTGCTCGCA TCTCGGCAGG
CCCAAGGGCG CCCCTGCGCC GGAATTTTCC CTCAAGCCGG TGGCCGTGCG TCTGGCGGAA
TTGCTCGGAC GCGAGGTGCG CATGGCTCCG GACTGCATCG GGCCCGAAGT CCAGGCCATG
GCCGAGGCGC TCAAGCCCGG CGAAGTCCTG CTGCTTGAAA ATCTGCGCTT TCATCCCGGC
GAGACCAAGA ACGATCCGGA CTTCAGCCGG GAGCTGGCCA AGCTGGGAGA GGTCTACGTC
AATGACGCGT TCGGCGCTTC CCATCGCGCT CACGCTTCGG TGGTCGGCGT GACGGAATTC
ATCAAGGATT GCTGCGGTGG ACTGCTGCTC AAGAAAGAGT GGCAGTACCT GGGCGAGGCG
CTGGAAGATC CGGCGCGTCC ATTCGTGGCC ATCATCGGCG GCGCCAAGGT TTCTTCCAAG
CTCGGCATTT TGAAAGCGTT GCTGGAAGAG GTCGACTCCA TGATCGTGGG CGGAGCCATG
GCCAACACGT TCCGCAAGGC CCAGGGTTTC GAGGTGGGCA CGTCCCTGGT CGAGGACGAT
CTGCTCGAAG AAGCCATGGC CATCATGGTC GAAGCGCGGG AAAAGGGCGT CAAGTTTTAC
CTGCCCGTGG ATTTCATTCT CGGCACCGAC CCCAAGGGCG GCATCGCCTC GGGCGTGCGC
ACCTATCAGG ATATCCCGGC CGATGAGATG ATCCTGGACA CCGGGCCCGC TTCGCACACG
CTTTTCGCCG AGGTCATCAA GAACGCCGGG ACCGTGATCT GGAACGGACC CATGGGCGCC
TTCGAAAATC CGGCCTTTGC CCAGGGTTCC ATCAATCTTT GCCGGGTGGT GGGCGCCGTT
TCGGGCATGA CCATTCTTGG CGGCGGCGAC ACCAACGTCA TCGTGGAGAA ACTGGGCATG
GCGGACAAGT TTTCCTTCAT TTCAACCGGA GGCGGTTCAT TTTTGGAGTT TTTGGAAGGC
AAGGAGCTGC CTGCCTTCAC CGCCCTGGAG AATAAGTCAT GA
 
Protein sequence
MRFLDELNVS GKRVLMRVDY NVPLKGDAIV DDNRIKQSLP TLNLALDNGA SLVICSHLGR 
PKGAPAPEFS LKPVAVRLAE LLGREVRMAP DCIGPEVQAM AEALKPGEVL LLENLRFHPG
ETKNDPDFSR ELAKLGEVYV NDAFGASHRA HASVVGVTEF IKDCCGGLLL KKEWQYLGEA
LEDPARPFVA IIGGAKVSSK LGILKALLEE VDSMIVGGAM ANTFRKAQGF EVGTSLVEDD
LLEEAMAIMV EAREKGVKFY LPVDFILGTD PKGGIASGVR TYQDIPADEM ILDTGPASHT
LFAEVIKNAG TVIWNGPMGA FENPAFAQGS INLCRVVGAV SGMTILGGGD TNVIVEKLGM
ADKFSFISTG GGSFLEFLEG KELPAFTALE NKS