Gene Dbac_0864 details

Gene Information

• Locus tag: Dbac_0864
• ID: 8376519
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 936520
• End bp: 938379
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 645000103
• Product: GTP-binding protein TypA
• Protein accession: YP_003157398
• Protein GI: 256828670
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTACG AGGAAAATAT GCCCACCATG CAGAATAATG ACAATATCAG AAATATCGCT 
ATCATAGCTC ACGTTGACCA TGGCAAGACC ACCCTGGTGG ACGTCATGTT CCGACAGTCC 
GGAGTGTTCC GGGACAACCA GGCCGTGGAT GACCGCATCA TGGATTCCAT GGATCTGGAA 
CGCGAACGCG GCATCACCAT CGCGGCCAAG AATTGTTCCG TGCGCTGGAA GGGCGTGAAG 
ATCAATATCG TCGACACCCC CGGCCATGCC GACTTTGGCG GGGAAGTGGA ACGCGCCCTG 
TCCATGGTCG ACGGCGCGGT CCTGCTGGTG GACTCCTCCG AAGGCCCGCT GCCCCAGACC 
CGTTTCGTGC TGAAAAAAGC GCTGGACGCG AGCCTGCCCA TCCTGGTCGT GGTCAACAAG 
ATCGACCGCG CCGATGCCCG GCCGCAGGAA GTGCTGGACG AGGTCTACGA CCTGTTCATC 
GACCTTGGCG CTGACGAGGA CCAGCTTGAA TTTCCTGTGC TCTACGCCAT CGGCCGCGAC 
GGCGTGGCTT CTCCGGTGCT TGAGGAACCG GGCACGGATC TGTCCTGCCT GTTCGACCTC 
ATTCTGGAAC GCATTCCCGG CCCTCGCTTC GATCCCGCCG CGCCGTTTCA GATGCTTGTT 
TCCGACCTGG GGTATTCCGA CTACCTCGGC CGTCTGGTCA TCGGCAAGAT CAAGGCCGGC 
CTGCTTCAGG AAAAGGCCGA TCTGCTGTGC ATCGGCGAAA ACGATCAGTA CTCCTTCCGC 
CCGACCAAGG TGCAGGCCTA CGAGGGCATG CAGCTCAAGG ATCAGGCCGC CGTCGAGATG 
GGTGACATCG TGGTCATGGC GGGATTGAAC AAGGTCGGCA TCGGCGACAC CATCTGCCTC 
AAAGAGAGCC CGGTGCGTCT GAAGCGCATC GACGTGGACG AGCCTACCGT GTCCATGCGC 
TTCACCATCA ACACCTCGCC CTTTGCCGGT CGCGAGGGTA AGATCGTGCA GTCGCGCAAG 
ATCAAGGACC GTCTTGAAAA AGAGGCCCTG ACCAACGTGG CCATCCAGGT CGAGGAGAGC 
GAGGATAAGG ACTCCATGGT CGTCAAGGGG CGCGGCGAAT TCCAGTTGGC CATCATCATC 
GAGACCATGC GCCGCGAAGG CTTCGAGCTT GGCGTCGGCC GGCCCGAGGT CATCTACAAG 
AAGGATGGCG GCAAGCTCCT TGAGCCCTTG GAGCACGTCT ACGTGGACTG CGACGAGTCC 
TTCATGGGCG TGGTCACGGA GAAACTGTCC ATCCGCCGCG GCAAGCTCCT CAATCTGGTC 
AACAACGGCA GCGGTCGCGT GCGCATGGAA TTTTCCGTGC CGTCGCGCGC GCTCATCGGC 
TACCGGGACG AATTTTTGAC CGACACCAAG GGCACGGGCA TCATGAACTC CCTGTTCGAC 
GGATACGGCG AGTACCGGGG TGATTTTCCG ACACGTTTTT CCGGCTCCCT GGTCTGCGAC 
AGACAGGGCC AGGCTGTGCC GTACGCGCTC TTCAACCTGG AGCCGCGCGG CCGGATGTTC 
GTGCGCCCGG GCGATGCGGT GTACGAGGGC ATGATCGTCG GCGAGCACAA CCGCGACAAC 
GACATCGACA TCAACCCCTG CAAGGAAAAG AAGCTGACCA ACATGCGCGC CTCGGGCAAG 
GATGAAGCCA TCATTCTCAC CCCCGTTCTG CCCATGACGC TTGAGATGGC GCTTAACTTC 
ATTCGTGACG ACGAGATGGT CGAAGTGACT CCGCAGAACA TCCGTCTGCG CAAGATCGAG 
CTTTCGGCCC AGAAGCGGCA CACCATGTCC GCGCGCAAGA AGAAAGTCGA AGGAAAATAG 

 

Protein sequence

MLYEENMPTM QNNDNIRNIA IIAHVDHGKT TLVDVMFRQS GVFRDNQAVD DRIMDSMDLE 
RERGITIAAK NCSVRWKGVK INIVDTPGHA DFGGEVERAL SMVDGAVLLV DSSEGPLPQT 
RFVLKKALDA SLPILVVVNK IDRADARPQE VLDEVYDLFI DLGADEDQLE FPVLYAIGRD 
GVASPVLEEP GTDLSCLFDL ILERIPGPRF DPAAPFQMLV SDLGYSDYLG RLVIGKIKAG 
LLQEKADLLC IGENDQYSFR PTKVQAYEGM QLKDQAAVEM GDIVVMAGLN KVGIGDTICL 
KESPVRLKRI DVDEPTVSMR FTINTSPFAG REGKIVQSRK IKDRLEKEAL TNVAIQVEES 
EDKDSMVVKG RGEFQLAIII ETMRREGFEL GVGRPEVIYK KDGGKLLEPL EHVYVDCDES 
FMGVVTEKLS IRRGKLLNLV NNGSGRVRME FSVPSRALIG YRDEFLTDTK GTGIMNSLFD 
GYGEYRGDFP TRFSGSLVCD RQGQAVPYAL FNLEPRGRMF VRPGDAVYEG MIVGEHNRDN 
DIDINPCKEK KLTNMRASGK DEAIILTPVL PMTLEMALNF IRDDEMVEVT PQNIRLRKIE 
LSAQKRHTMS ARKKKVEGK