| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0648 |
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| Symbol | dapF |
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| ID | 8376301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 722509 |
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| End bp | 723348 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644999890 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003157187 |
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| Protein GI | 256828459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.312023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCATTT TCACCGGCCC GACCCAGTTT TTTTACAAGA TGCAAGGCAG CGGCAACGAC
TTCATCGTCA TCGACAACCG CGCCAAGACC ATCTCCCCCG AGGACATGCC CCGCTGGGCC
AAAACGCTGT GCCCTCACGC TTTCAGCATC GGCGCCGACG GCATCATATT TCTGGAAATT
GACGACTCCG GGCAGGCCGC AACGCGTTGG CACTTTTTCA ATGCCGACGG CTCCAGGGCC
GAGATGTGCG GCAACGGGTC GCGCTGCGCC ACCCTCCTGG CCTACATGCT GGGCATGGCC
CCGGCCAAAC ACCTCATGCT CACCGATGCG GGCACGGTGC ACGCACAAGT CTTCCCCGAG
GCAGGCGAAG TGGACGTGCA GCTGACCCCG GCGCGGGACA TGGCCCTGAA CTTCACCCTT
GATCTGGACG ACCGAACCTT TGCAGCCCAT TTCGCCAACA CCGGCGTCCC GCACGCGGTC
ATAGTCACGC CCGACGTCAA GAGCATCGAC GTGAAAGGGC TTGGAGCCAA GGTCCGCTAT
CACGACCACT TCGCCCCGGC CGGAACCAAC GCCAACTTCA TCCAGGTCGT CAGCCGAGGC
GAGCTTCTGC TGCGCACCTA CGAACGCGGC GTGGAGAGCG AAACCTATGC CTGCGGCACG
GGCGCTGCGG CCTCCGTGGC CGTGGCCCAC GCGCTGGGTC TGTGCGAATC CAAGGCCAAA
GTGACCACTT CGGGTGGCGA GGTGCTTGAG ATCAGCGTTC ACGGCTCGGA TATTTTCCTG
CGCGGCAAAG CCCAACTCGT CTACAAGGGC GAGTTCTGCC CCGCCGCCTT GGGCCTCTAA
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| Protein sequence | MTIFTGPTQF FYKMQGSGND FIVIDNRAKT ISPEDMPRWA KTLCPHAFSI GADGIIFLEI
DDSGQAATRW HFFNADGSRA EMCGNGSRCA TLLAYMLGMA PAKHLMLTDA GTVHAQVFPE
AGEVDVQLTP ARDMALNFTL DLDDRTFAAH FANTGVPHAV IVTPDVKSID VKGLGAKVRY
HDHFAPAGTN ANFIQVVSRG ELLLRTYERG VESETYACGT GAAASVAVAH ALGLCESKAK
VTTSGGEVLE ISVHGSDIFL RGKAQLVYKG EFCPAALGL
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