Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0354 |
Symbol | |
ID | 8376002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 418864 |
End bp | 419613 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644999595 |
Product | ABC transporter related |
Protein accession | YP_003156897 |
Protein GI | 256828169 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.774428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATCC ACCATATCGT CCGCGTGGTC GCAGTGACCA AGACCTTCTC TCTGGGCAAG ATGCCGGTGC AGGTTTTAAA AGGGGTGGAC CTTGAGGTCG AGGCCGGGGA ATACCTGTCC ATCATGGGCC CTTCCGGTTC TGGAAAAAGC ACCCTCTTCA ACATGATCGG CGGACTGGAC AAGCCCACCA GCGGCCGCGT GTTCATCGAC GAGGTCGATA TCTCCCAGCT TGACGCCTAC GAACTGGCCT GGCTCAGGAA CCGCAAGATC GGCTATATTT TTCAGACCTT CAATCTCATC CCGGTCATGA GCGCGCTGGA AAACGTCACC CTGCCGATGA TTTTCGCCGG CATGTCCGGC GATGACGCGG TGGAAAAGGG GCGAGGGCTT TTAGACTTGG TCGGGCTTGG AGAGCGGTTT CAGCATAAGC CTTCGGAGCT CTCCGGCGGC CAGCAGCAGC GGGTGGCCAT TGCCCGCGCC CTGGCCAACG ACCCGGCCAT CATCCTGGCC GACGAACCAA CAGGCAATCT CGATTCCTCC ACGGGCGGGG AGATCATCGC CCTGCTTCAG AAAATGAGTC AGCAGCGGCA GGTCACGGTC ATCTCCGCCA CCCACGACTT CAAGATGCTC AACGTATCCG ACCGGGTGGT CTGGATCCGG GACGGACGCA TCGACAAGAT CGAACACCGT GACGAACTCA GCATCTCCAT CGGCACCATC CAGGAGCGTC ATGAGTCCGC GCATTCATAA
|
Protein sequence | MDIHHIVRVV AVTKTFSLGK MPVQVLKGVD LEVEAGEYLS IMGPSGSGKS TLFNMIGGLD KPTSGRVFID EVDISQLDAY ELAWLRNRKI GYIFQTFNLI PVMSALENVT LPMIFAGMSG DDAVEKGRGL LDLVGLGERF QHKPSELSGG QQQRVAIARA LANDPAIILA DEPTGNLDSS TGGEIIALLQ KMSQQRQVTV ISATHDFKML NVSDRVVWIR DGRIDKIEHR DELSISIGTI QERHESAHS
|
| |