Gene Dbac_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0252 
Symbol 
ID8375892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp296400 
End bp297506 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID644999486 
Productamidohydrolase 
Protein accessionYP_003156795 
Protein GI256828067 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00951952 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAG CGATCCGTGC CGCGCGTATC CTGACCATGA ATCCGCAGTG TCCCGAGATT 
CGGGATGGCG GAATTCTGGT CCGGGAGGGG CGCATCCTGG CCGTGGGAGG CTGGCGCGAA
GTGGCCGGGA ATGGAGCTTG TCGCGATCTG GGGCCGGTGA CCATCGTGCC TGGCCTCATC
AATGCCCATG TTCATCTGGA ATTGTCGCAT TTGGCCGGAC GGGTGCCCGG CGGCCGGAGC
TTCGAGGCCT GGGCGGACGG CCTCTTTGCC GCCATGCGCG AAAGCAGGGT GACTGAAGCG
GCGATGGCGC GGGCGGTGGC GGAGGCGCGC GCAAGCGGAA CCTGCTACAT GGCCGATGTG
GTCGGCCGTG AATTCGACAT GGTCCGCCGC GTATTGGAAA GTCAGGGGGT TGGCGGCTTC
CTGTTCAACG AATTTTCGGG TCGGGCCCGC GAATTTTGTC CCAGGTCCCT GCCCAGGGAC
TGGAGTCCGG GCGTGCACGC CTTATATTCC ACGGACCACA CCCTGGCCCG GTCCATCAAG
GAATGGTGCG CATCCCGTTG TCTTCCTTTC AGCCTGCATC TGGCCGAAGT GCCGGGAGAG
AACGAACTTT TTCAAAGCGG CGGCGGTGAG TTTGCCGATT TTCTGCGCAC CCGCCGCATT
TTGCCCAAGG GATTTGCCGC GCCGGGCCTC AGCGCCGCCA GGTTCGCACG CGAACTTGGT
CTGCTGGACG AACGCACTTT GGCGGTGCAT TGTGTGCACT TGGACGAAAA CGATGTGGAG
ATTGTGGCCG CAAGCGGAGC CCGGGTCTGC CTGTGTCCGC GCAGCAACCG CCAGATCGGA
GTAGGCGACG CGCCCGTGGC CGCGTTGTGC GCGGCGGGAG TTCCTCTGTG TCTGGGTACG
GATTCCCTGG CGTCGGTCCC CAGTCTCGAC CTGTGGCAGG AGCTGCGGGC CGTGCGTGCG
CTCATGCCCT CTACGGCGTC TCTCTTTGAT CTTCTGGAGC TGGTGACCCG CAATCCGGCC
AGGGCGCTTG GAATTGACGC GGACTATGGG AGCCTGGCCG TCGGTAAGCG CGCAGTCTGG
GCGGTGCTTC CGGATGATAT GCAATGA
 
Protein sequence
MTEAIRAARI LTMNPQCPEI RDGGILVREG RILAVGGWRE VAGNGACRDL GPVTIVPGLI 
NAHVHLELSH LAGRVPGGRS FEAWADGLFA AMRESRVTEA AMARAVAEAR ASGTCYMADV
VGREFDMVRR VLESQGVGGF LFNEFSGRAR EFCPRSLPRD WSPGVHALYS TDHTLARSIK
EWCASRCLPF SLHLAEVPGE NELFQSGGGE FADFLRTRRI LPKGFAAPGL SAARFARELG
LLDERTLAVH CVHLDENDVE IVAASGARVC LCPRSNRQIG VGDAPVAALC AAGVPLCLGT
DSLASVPSLD LWQELRAVRA LMPSTASLFD LLELVTRNPA RALGIDADYG SLAVGKRAVW
AVLPDDMQ