Gene Dbac_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0182 
Symbol 
ID8375816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp213297 
End bp214733 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content59% 
IMG OID644999410 
Productputative transcriptional regulator 
Protein accessionYP_003156725 
Protein GI256827997 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAAA ATCAGCTTAT GGAATGGAAA GAATCCTGGC GGGACGAGTA CCTGAAATGG 
ATTTGTGGCT TTGCCAATGC CCAGGGTGGC GTGCTGCACA TTGGCCGCAA TGACCGGGGC
GAGGTGCTCG GTCTGGCTGA TGCCCACAAA CTGCTGGAGG ACCTGCCCAA CAAGACGCGC
GACCTGCTGG GCATCGTGGT CGGCGTCCAT CTGCATGAGG AAGCTGGCAA AGAGTATCTG
AAAATTGTCA CCCCCGCGCA CCCGGCACCC ATCAGCTACA AAGGACACTA CTACCAACGC
AGCGGCAGCA CCCTGCAGGA ACTGAAAGGA CCCGCCCTGG ATCGCTTCCT TTTGCGCCGC
TTCGGACGAA CATGGGACGG CGCGCCCGTG CCGGGAATCC AATCGAGTGA CCTCTCCGCC
GCCGCGTTCT CCCGGTTCCG TCAACTCGCC ACTCGCAGCG GCCGTCTGGA TATGGCGGAC
CTGGAGGAAG AAGACGCCGG CTTACTGCTC AAGCTGAAGC TGACCGAAGG GGCGTATCTG
AAACGCGCCG CCGTGCTGCT GTTCCACCCG GAGCCGCAGG CTTACGTGGC CGGGGCGTTC
GTGAAGATCG GCTTTTTCCG CTCACCCTCG GACTTGGCCT ACCACGACGA AGTCACTGGC
GATCTGTTCA GCCAGACCCG GCAAATCCTG GACCTGCTCC AGACAAAATA TCTCAAGGCG
GCTGTGACCT ACGAGGATAT CCTGCGCGTG GAGCGCTTTC CCGTGCCGCG CGGGGCTCTG
CGTGAGGCGG TGCTCAATGC CCTGGTCCAT CGGGATTACG CCGTGGCCGC CCCTATTCAA
ATTCGCGTCT ATAATGACCG TCTGGTGATC TGGAACCCTG CAGTGCTGCC GGAGGGATGG
ACCGATCAGA CCCTGCTGGC GGGCCATGTG TCCCATCCCT TCAATCCGGA AATCGCCAAC
GTCTTTTTCC GTGCCGGTGA AATCGAAGCC TGGGGCCGTG GTATCGAGCG CATTTTCCAA
GCTTGCCGGG AGGACGGCAC TCCCGATCCC GTGCTACGGA TTGAAGCCAA CGGTCTGCGT
CTGGAATTCC TCTTTGCGGA GACCTATCTG ATCCTTCTTG GGGGAGGTCC GATGGTTCCA
GAGCAGACCC CACCAGTCAC CCCACCAGTC ACCCCACCAG TGGATCCTTC CGTACTGGCG
TTGCTTAAAC TATTGAACAC GGCTGGTCCC CTGGGCAATG CGGAAATTCG CAACGCCCTG
GATCTCAAGG ATCGCACGCA TCTGCGCGAA CGCTACCTCA ATCCCGCGTT GGAGCAGGGC
GTGATTGTCA TGACCATCCC GGAAAAACCC AGAAGCAGTT TGCAGAAATA CCGGTTGTCG
GTTCTCGGCC AGGATATCAT TTCACGAATG CAGACCAGAA AGAACGACAA ATCGTGA
 
Protein sequence
MKENQLMEWK ESWRDEYLKW ICGFANAQGG VLHIGRNDRG EVLGLADAHK LLEDLPNKTR 
DLLGIVVGVH LHEEAGKEYL KIVTPAHPAP ISYKGHYYQR SGSTLQELKG PALDRFLLRR
FGRTWDGAPV PGIQSSDLSA AAFSRFRQLA TRSGRLDMAD LEEEDAGLLL KLKLTEGAYL
KRAAVLLFHP EPQAYVAGAF VKIGFFRSPS DLAYHDEVTG DLFSQTRQIL DLLQTKYLKA
AVTYEDILRV ERFPVPRGAL REAVLNALVH RDYAVAAPIQ IRVYNDRLVI WNPAVLPEGW
TDQTLLAGHV SHPFNPEIAN VFFRAGEIEA WGRGIERIFQ ACREDGTPDP VLRIEANGLR
LEFLFAETYL ILLGGGPMVP EQTPPVTPPV TPPVDPSVLA LLKLLNTAGP LGNAEIRNAL
DLKDRTHLRE RYLNPALEQG VIVMTIPEKP RSSLQKYRLS VLGQDIISRM QTRKNDKS