Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_30680 |
Symbol | |
ID | 8401612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 3470323 |
End bp | 3471879 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644999100 |
Product | histidine ammonia-lyase |
Protein accession | YP_003156419 |
Protein GI | 257070164 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.86432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTT CCGCCGCCCC TGCCGCCGTC TCCCTGTCCA CCAGCGGTCT CACCGCCGCG GACGTCCTCG CCGTCGCCCG CCGCGGCGCC CTGGTGGAGC TCGACCCCGC CGCGCGCGAG CAGGTCGCCG CCGTGCGCTC CCACATCGAC GCCCTCGCCG CCGGGGACAC CCCCGTCTAC GGCGTCTCCA CCGGATTCGG TGCGCTCGCC GACACGTCGA TCCCGCCGAG CATGCGCCAC GCCCTGCAGC GCTCCCTGAT CCGCTCCCAC GCCGCCGGCA CCGGGCCCGA GGTGGAGACC GAGGTGGTGC GCGCCCTCAT GCTGCTGCGC GCCCGCACCC TCGCCTCCGG CCGCACCGGG GTGCGACCCG TCGTGGTCGA GACGATGCTC GCGCTGCTGA ACGCCCACAT CACCCCGATC GTCCACGAGT ACGGCTCGCT GGGCTGCTCC GGGGATCTCG CCCCGCTCTC CCACTGCGCG ATCGTGCTGA TGGGGGAGGG GCGCGCCCGC GACCGGGAGG GCGCCGAGCG CCCGGTGCCG GAGCTGCTGG CCGAGGCCGG GATCGCGCCG GTGCTGCTCG AGGAGAAGGA GGGCCTCGCG CTCATCAACG GCACCGACGG CATGCTCGGC ATGCTGCTGC TGGCCCTCGC CGACCTCGAC GAGCTGGTGC GCGCCGCGGA TCTCACCACC GCCCTGTCCG TGCAGGCCCT GCGCGGCCGC GACACCGTGT TCCGCCCCGC GCTGCACACC CCGCTGCGCC CGCATCCCGG GCAGGCCGCC TCCGCCGCGA ACATCCTGGC CGTGCTCGAG GGCTCGCCGA TCATCGCCGA CGTCGCCGCG GAGGGCTCCC GCGTGCAGGA TGCGTACTCG CTGCGCTGCG CCCCGCAGGT CGCCGGCGGC GTGCGCGACA CGATCGAGCA CGCCCGCGGC GTCGCCGAGC GCGAGCTCGC CGCCGCGATC GACAACCCCG TGGTGCTCGA GGACGGCACC GTCACCTCCA ACGGCAACTT CCACGGCGCG CCCGTGGCCT ACGTGCTCGA CTTCCTCGCC GTGGTGGGCG CGGACCTCGC CTCGATCGCG GAGCGCCGCA CCGACCGGAT GCTCGACAAG GCCCGCTCCC ACGGCCTGCC GCCCTTCCTG GCCGACGACC CGGGCGTGGA CTCCGGCTTC ATGATCGCCC AGTACACCCA GGCCGCCCTG GTCTCGGAGA TGAAGCGCCT GGCGATGCCG GCGAGCGTGG ACTCGATCCC CTCCTCCGCG ATGCAGGAGG ACCACGTCTC GATGGGCTGG CACGCCGCCC GCAAGCTGCG CACCAGCGTG GAGAACCTCC GGCGGGTGCT CGCGATCGAG CTGCTCACCG CCGCCCGGGC GATCGACCTG CGCGCCCCGC TGGCCGCGTC GGCCGCCTCC GCCGCCGCCA TCGCGGTGCT GCGCCGCACC GTGGAGGGGC CCGGCCCGGA CCGCTTCCTC GCCCCGGACA TCGCCGAGGC CGAGGCACGG CTGCGGGACG GAACCGTGCT GGCCGCGGTG GAGGGAGTCC TCGGCACGCT GCGCTGA
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Protein sequence | MTRSAAPAAV SLSTSGLTAA DVLAVARRGA LVELDPAARE QVAAVRSHID ALAAGDTPVY GVSTGFGALA DTSIPPSMRH ALQRSLIRSH AAGTGPEVET EVVRALMLLR ARTLASGRTG VRPVVVETML ALLNAHITPI VHEYGSLGCS GDLAPLSHCA IVLMGEGRAR DREGAERPVP ELLAEAGIAP VLLEEKEGLA LINGTDGMLG MLLLALADLD ELVRAADLTT ALSVQALRGR DTVFRPALHT PLRPHPGQAA SAANILAVLE GSPIIADVAA EGSRVQDAYS LRCAPQVAGG VRDTIEHARG VAERELAAAI DNPVVLEDGT VTSNGNFHGA PVAYVLDFLA VVGADLASIA ERRTDRMLDK ARSHGLPPFL ADDPGVDSGF MIAQYTQAAL VSEMKRLAMP ASVDSIPSSA MQEDHVSMGW HAARKLRTSV ENLRRVLAIE LLTAARAIDL RAPLAASAAS AAAIAVLRRT VEGPGPDRFL APDIAEAEAR LRDGTVLAAV EGVLGTLR
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