| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_28920 |
|---|
| Symbol | |
|---|
| ID | 8401436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3258518 |
|---|
| End bp | 3259681 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644998924 |
|---|
| Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
|---|
| Protein accession | YP_003156243 |
|---|
| Protein GI | 257069988 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.327386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCG GAATCTTCAC CATCGCCGAC ATCACGCCGG ACCCGACCAC GGGCCGGGTG
CCCACCGAGA ACGAGCGCCT GCGCAACATG GTCGAGCAGG GCAAGCTCGC CGAGCAGGTG
GGGCTGGACG TGTTCGCGAT CGGCGAGCAC CACAACCCGC CGTTCGTCAC CTCCTCCCCC
ACCACCACCC TCGCCTACGT CGGCGCGCAG ACGGAGCGGA TCATCCTCTC CACCGCGACC
ACGCTGATCA CCACCAACGA CCCGGTGAAG ATCGCTGAGG ACTATGCGAT GCTGCAGCAC
CTCACCGGGG GTCGCGTCGA TCTGGTGATG GGCCGCGGCA ACACCGGCCC GGTCTACCCC
TGGTTCGGGC AGGACATCCG CAAGGGAATC GAGATCGCGA TCGAGAACTA CGATCTGCTG
CGCCGGCTGT GGACGGAGGA CGTCGTGGAC TGGGAGGGCC AGTTCCGCAC CCCGCTGCAG
CAGTTCACCT CCACCCCGCG CCCGCTGGAC GGCGTCGCGC CGTTCGTGTG GCACGGCTCG
ATCCGCTCCC CGCAGATCGC CGAGCAGGCC GCGTACTACG GCGACGGATT CCTGCACAAC
AACATCTTCT GGCCCATGAG CCACACCAGG CAGATGGTGC AGCTGTACCG CGAGCGCTAC
GAGCACTACG GCCACGGCAA GGCCCACCAG GCCTACGTGG GCCTGGGCGG GCAGGCGTTC
ATGCGCAAGA ACTCCCAGGA CGCCGTCGAC GAGTTCCGCC CCTACTTCGA CAACGCCCCC
GTCTACGGCG GCGGGCCCTC GATGGAGGAG TTCACCCGCG CCACGCCGCT GACCGTCGGC
TCCCCCGAGC AGGTCATCGA GCGCTACCTC GCGATGGCCG ATCACGTGGG CGACTACCAG
CGCCAGATGT TCCTCATGGA CCATGCGGGA CTGCCGCAGA AGACGGTCCT CGAGCAGATC
GAGCTGCTGG GCACCGAGGT GGTCCCGGTG CTGCGCCGCG AGCTCGCGGC GCGCAAGCCG
GCGGACGTCC CGGAGGCACC CACCCACGCC GCCCGGGTCG CCGAGGCAGA ATCACGACAC
GGCACCTTCG ATGACAGCTA CCGGTTCGAG ACCGGTGACA ACTGGACCGG CCTGCGGGCC
GAGGACAGGC AGGAGCAGCA CTGA
|
|---|
| Protein sequence | MQFGIFTIAD ITPDPTTGRV PTENERLRNM VEQGKLAEQV GLDVFAIGEH HNPPFVTSSP
TTTLAYVGAQ TERIILSTAT TLITTNDPVK IAEDYAMLQH LTGGRVDLVM GRGNTGPVYP
WFGQDIRKGI EIAIENYDLL RRLWTEDVVD WEGQFRTPLQ QFTSTPRPLD GVAPFVWHGS
IRSPQIAEQA AYYGDGFLHN NIFWPMSHTR QMVQLYRERY EHYGHGKAHQ AYVGLGGQAF
MRKNSQDAVD EFRPYFDNAP VYGGGPSMEE FTRATPLTVG SPEQVIERYL AMADHVGDYQ
RQMFLMDHAG LPQKTVLEQI ELLGTEVVPV LRRELAARKP ADVPEAPTHA ARVAEAESRH
GTFDDSYRFE TGDNWTGLRA EDRQEQH
|
|---|
| |