| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_28770 |
|---|
| Symbol | |
|---|
| ID | 8401421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 3238190 |
|---|
| End bp | 3239635 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644998909 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003156229 |
|---|
| Protein GI | 257069974 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACG AGTCGACGGC GCATCGTGGC GCCGAGCATT CCGAGGTGTC CACCGCCTAC
CTCCAGCAGC TCGACGAGGA GCGCGAGTCG GCGATGTGGA GCGTGAGCCA TCCCGGCTCC
GCCTTCGCCG GCGCGCCGCG GGCGCTGCAC GACCGGCTCG AGCAGCAGCT GGCGGCCGAC
GCGGACGAGA TGATCGCGCT GATGCTCGAT CTGGCCGCGC ATCCCGAGGT GGCTTTCGAG
GAGCACCGCT CCGCCCGGGC GATCGCCGGG TCCCTCGCCG CCCACGGCAT CGACGCGCAG
GTGGGCGTGC ACGGTCTGGA CACCGCGATC CGGGCCGAGA TCCGCGGGAC CGGCACGGCG
CGGGCCGGCG CAGAGACAGA GACAGAGACG GAGGCCGAGA CAGAGACACA GGGGGTCGAG
GGGCCGGCCG TCGAATCGGC CGACGGGCCG ACCTACGCGA TCCTGTCCGA GTACGACGCG
CTGCCCGGGG TGGGCCACGG CTGCGGTCAC AACGTCATCG CCGTGATGGG GCTGGGGGCG
TTCCTCGCCC TGGCCGCGCT CGCGAAGGAG GACCCGTCGG CCGTGCCCGG GCGGGTGGTG
TTCCTCGGGA CCCCCGCCGA GGAGGGCCAC ACCGGCAAGG AGCACATGGC CCGTGAAGGG
GCGTTCGAGG GGCTGGACGC CGCGGTGATG GCGCACCCCT ACGGATATGA CCTGGCCGAT
CAGACCTGGC TGGGGCGTCG CACGCTCACC GTCGAGTTCC ACGGCCACAC CGCCCATGCC
TCGGCCCAGC CGTACATGGG CCGCAACGCG CTGGACGCGG CGAACCTCAT GTACCAGGGC
ATCGGTCTGA TGCGGCAGCA GACCCCGCCG ACGGATCGCA TCCACGCCGT GATCCGCGAG
GGCGGCGACC GCGCCAGCGT GATCCCCGAC CGGGCGCGGA TGGACCTGTA CGTCCGCTCG
CAGCGGCCCG AGACCCTCAA GGACCTCTCG CGGCGGGTCG AGGACGTGGC CCGCGGGGCG
GCGCTCATGG CCGGCGTGGG CGTCTCCGTG CGCTGGGACG AGCATCCGCC GTCGCTGCCG
GTGCGCACCA ACGAGGCGCT CACCGGGCGG TGGGTCGAGG CGCAGCGCCG TCGGGGCCGC
GATCCGCTGC CGCACGGCGT GGTCTCGCCC TCGCTCGCGG CCTCCACCGA CTTCGGCAAC
GTCAGCTATC GGATCCCCGG CATCCATCCG GTGATCCGGA TCGCGCCGCC GGAGGTCGCG
CTCCACACCC GCGAGTTCGC GGCCTGTGCC GTCTCCGCGG ACGCCCGCGC CGCCGCGGCC
GACGGGGCCT ACGGCCTCGC CGCGACCGTG CTCGATGCCC TCCACGACCG CGTGCTCGCC
GCCGCGGCGG TCGAGGAGTT CCGGGCCGCG GGCGGGCCGA TCGACGTGCC CCGCTACTTC
GACTGA
|
|---|
| Protein sequence | MSHESTAHRG AEHSEVSTAY LQQLDEERES AMWSVSHPGS AFAGAPRALH DRLEQQLAAD
ADEMIALMLD LAAHPEVAFE EHRSARAIAG SLAAHGIDAQ VGVHGLDTAI RAEIRGTGTA
RAGAETETET EAETETQGVE GPAVESADGP TYAILSEYDA LPGVGHGCGH NVIAVMGLGA
FLALAALAKE DPSAVPGRVV FLGTPAEEGH TGKEHMAREG AFEGLDAAVM AHPYGYDLAD
QTWLGRRTLT VEFHGHTAHA SAQPYMGRNA LDAANLMYQG IGLMRQQTPP TDRIHAVIRE
GGDRASVIPD RARMDLYVRS QRPETLKDLS RRVEDVARGA ALMAGVGVSV RWDEHPPSLP
VRTNEALTGR WVEAQRRRGR DPLPHGVVSP SLAASTDFGN VSYRIPGIHP VIRIAPPEVA
LHTREFAACA VSADARAAAA DGAYGLAATV LDALHDRVLA AAAVEEFRAA GGPIDVPRYF
D
|
|---|
| |