Gene Bfae_28680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_28680 
Symbol 
ID8401412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3229106 
End bp3230131 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID644998902 
Productpredicted beta-xylosidase 
Protein accessionYP_003156222 
Protein GI257069967 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGCA CGGACGAGCC GACCCTGAAC CCGCTGGTGC TGCAGCGCGC CGACCCCTGC 
GTGCTGCGGC ACGAGGGGCA GTACTACTTC ACCGCCTCGC ACCCGCAGTA CGACCGCATC
ATCCTGCGCC GCGCCGAGAC CCTCGACGGC CTCCAGGCGG CCGACGAGGT CGCCATCTGG
CACAAGCACG ATCAGGGCCC CCAGTCCGAG CTGATCTGGG CCCCGGAGAT CCACCGCGTG
CACGGCGCCT GGTACATCTA CTACGCCGCC GCGCCGAACG CGCACGGCAC CGCAGATGCG
CCCAGCACCA ACGAGACCTT CAACCACCGG GTGTTCGTCC TCGAGAACAC CGCCGCGGAT
CCCTTCACGG GCGAGTGGGC CGAGCGCGGC CAGGTCGACA CCGGCTGGGA ATCGTTCGCG
CTGGACGCGA CGAGCTTCGT GCACGGCGAC CGGCAGTACC TGGTGTGGGC CCAGGAGGAC
CTCGAGGTCG AGGGCCATTC GAACCTCTAC ATCGCCCCGA TGGAGAACCC CTGGACCCTC
GCCGGCCCCG CCGTCGAGCT CACCCGGCCC GAGCACGACT GGGAGATCAA GGGCTTCTGG
GTCAACGAGG GACCGGCCGT CCTCGAGCAC GAGGGCACCC TCTACCTCAC CTACTCGGGC
GCGGCCACCG GCATCGACTA CGCGATGGGC GTGCTCACCG CGTCGGCCGA CGCGGACCTG
CTCGACCCCG CCTCCTGGAC CAAGAGCCCC ACCCCGGTGT TCGTCTCCGA TCCGAGCGTG
CAGCGGTACG GCCCGGGCCA CAACTCCTTC ACCACCACGC CCGACGGCCA GCCGGTGCTG
GTCTACCACG CACGCACCTA CACCCACATC GAGGGCGACC CGCTGCGCGA CCCCAACCGT
CACGCCTGCG CACAGGTGCT GCGCTTCGAC GAGGCGGGAC GCCCCCTCTG GGGCACCCCC
GCCCCGGGCA CCCGCCCGGC CCCGACCTCC ACCGAGGTGC TCCCGCCCTC GGGTGAGTTC
TCATGA
 
Protein sequence
MRRTDEPTLN PLVLQRADPC VLRHEGQYYF TASHPQYDRI ILRRAETLDG LQAADEVAIW 
HKHDQGPQSE LIWAPEIHRV HGAWYIYYAA APNAHGTADA PSTNETFNHR VFVLENTAAD
PFTGEWAERG QVDTGWESFA LDATSFVHGD RQYLVWAQED LEVEGHSNLY IAPMENPWTL
AGPAVELTRP EHDWEIKGFW VNEGPAVLEH EGTLYLTYSG AATGIDYAMG VLTASADADL
LDPASWTKSP TPVFVSDPSV QRYGPGHNSF TTTPDGQPVL VYHARTYTHI EGDPLRDPNR
HACAQVLRFD EAGRPLWGTP APGTRPAPTS TEVLPPSGEF S