| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_28610 |
|---|
| Symbol | |
|---|
| ID | 8401405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3220361 |
|---|
| End bp | 3221941 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644998895 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_003156215 |
|---|
| Protein GI | 257069960 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCCA GACTTATCGA GTCGATGAAC GACTACATCT GGTCGATCCC GCTGATCGTC
CTATGCCTGC TCGCCGGCTT GTACTTCACC ATCCGCACCG GCCTCCTCCA GGTGCGCAAC
CTCCCCGACA TGCTCGACCA GCTCAAGAAG GGCAAGACCT CGCCGGACGG CACCTCCTCC
TTCCAGTCGC TGATGATGTC CCTCGCCGGA CGCGTGGGCA TGGGCAACAT CGGCGGTGTC
GCCACCGCGA TCGCCTTCGG CGGCCCGGGC GCCGTGTTCT GGATGTGGGC CTCCGCCTTC
CTCGGCGCCT CCACCTCCTT CATCGAGTGC ACCCTCGGCC AGATCTACAA GGAGAAGGAT
CCGGACACCG GCGAGTACCG CGGCGGCCCG GCGTACTACT TCGAGAAGGC CTACAAGCAC
AGGTTCCGCG GCCTGTCGGT CCTCTACGGC ATCCTCTTCG CCGCCGTCAC CATCATCGCG
ATGAGCGTCT TCCTGCCGGG CGTGCAGGCC AACGGCATGG CCTCCGCGAT CCACAACGCC
TGGGACATCC CCACCTGGGT GACCGCTATC GGCCTCGTGA TCCTGCTGGG CTTCATCGTC
ATCGGCGGCG TGAAGCGCAT CGCCCACTTC GCCGTGATCG TGGTGCCGGT GATGGCGATC
CTCTACGTCC TCATCGCCCT CGTCGTGTTC TTCCTGAACT TTGAGGACAT CCCGCGCGTG
TTCGGCCTGA TCTTCGGCAG CGCCTTCGGC GTCCAGCCGG TCTTCGGCGC GATCCTCGGC
CTGGCCATCA AGTGGGGCGT GCAGCGCGGC ATCTACTCCA ACGAGGCCGG CCAGGGCACC
GGCCCGCACG CCGCGGCGGC GGCCGAGGTC TCCCACCCGG CCAAGCAGGG CTTCGCCCAG
TCGTTCTCGG TGTACATCGA CACGCTGTTC GTGTGCTCCG CGACCGCGTT CATCATCATC
TCCACCGGCA TGTTCAACAC CTTCGAGAAC GAGAAGTGGC TCGACGGCAC CTCGCCGGTG
ATCGGCGGCG GCATCGGCGA CCTGCCGGTG GATGTCGAGC CCGGCCCCGG CTTCGTGCAG
GCCGGCCTCG ACTCGGTGTT CCCCGGCGCC GGCCCGAGCT TCATCGCGAT CGCGCTGTCG
TTCTTCGTGT TCACCACGAT CGTGGCCTAC TACTACATGG CCGAGGTGAA CCTGAACTAC
CTCACCCGCA AGATGAAGAA CCGCGTGCTG GCGCGGGCCA TCTTCCGCCT CCTGCAGGCG
CTGGTGCTGG TCTCCGTCGC CTACGGCGCC GTGACCACCG CCGGCTCCGC CTGGGGCCTG
GGCGACATCG GCGTGGGCAC CATGGCCTGG CTGAACATCA TCGGCATCCT GCTCATCCAG
GGCCCGGCCC TGAAGGCGCT CAAGGACTAC CGCCAGCAGA AGAAGAAGGG GCTGGATCCG
CAGTTCGACC CGCGCAAGCT CGGCATCGAG GGTGCGACCT TCTGGGAGCT GCGGGCCGAC
GGCCACCAGC TGCACGGCAA GACCGGCGGC GAGCTGCCGC CGGAGGTGCG GGGCATCGAC
TCCGACCCCG CCAGCCGCTG A
|
|---|
| Protein sequence | MFARLIESMN DYIWSIPLIV LCLLAGLYFT IRTGLLQVRN LPDMLDQLKK GKTSPDGTSS
FQSLMMSLAG RVGMGNIGGV ATAIAFGGPG AVFWMWASAF LGASTSFIEC TLGQIYKEKD
PDTGEYRGGP AYYFEKAYKH RFRGLSVLYG ILFAAVTIIA MSVFLPGVQA NGMASAIHNA
WDIPTWVTAI GLVILLGFIV IGGVKRIAHF AVIVVPVMAI LYVLIALVVF FLNFEDIPRV
FGLIFGSAFG VQPVFGAILG LAIKWGVQRG IYSNEAGQGT GPHAAAAAEV SHPAKQGFAQ
SFSVYIDTLF VCSATAFIII STGMFNTFEN EKWLDGTSPV IGGGIGDLPV DVEPGPGFVQ
AGLDSVFPGA GPSFIAIALS FFVFTTIVAY YYMAEVNLNY LTRKMKNRVL ARAIFRLLQA
LVLVSVAYGA VTTAGSAWGL GDIGVGTMAW LNIIGILLIQ GPALKALKDY RQQKKKGLDP
QFDPRKLGIE GATFWELRAD GHQLHGKTGG ELPPEVRGID SDPASR
|
|---|
| |