| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_28080 |
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| Symbol | |
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| ID | 8401352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | - |
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| Start bp | 3153354 |
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| End bp | 3155102 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644998844 |
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| Product | predicted transcriptional regulator with HTH domain |
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| Protein accession | YP_003156164 |
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| Protein GI | 257069909 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT TCGGAGTCGA CCCCGTCGCC GACGCCGTCG ACGCAGCCCT TCGTGCTGTC
GAGCGCGGCG AGAATCCTTC GGAGCGACGC CTGTTCGACT TCAAGGAGGA GGCTGGCCGG
CGGGGCGCCG ACGGCACCCT CCGTCCGGGA GATCCGCACA ACGATCCTGC GGCGAGGAAG
CTCGCAGGGG AGGTCGCCTG CATGGCGAAC TCAGTGGGTG GCGGCGCGCT CATCGTGGGG
ATCGGTGCCG ACGGCACGCC GATCGGTGCC GTGCTCGACG CAGACTGGTT GCAGGTGCGC
CTCTTCCAAC TGCTCCAGCA GTCGTACACC ACTGTGGTGA CCCCGGCTCA GGTATGCGGG
GCCAGGGTGC TGATCATCCG CTGCCCACCG GCGGTCGAGC CGATCCGGTG GCAGAACCGG
ATCACATGGC GCGTGGGGGA CCAGTGCCAA GACATCGACC CCGCAACCTG GCACGAGCGA
CGTGCGCGGT CCTGGGGGTA TGACTGGTCT GCGCAGAGCA GCGGGCTGGC TCCTTCCCAG
GTCCGTCCAC AGGCCGTTCT GATCGCGCGG GGCTTCTTGC AGAGTTCCGG TGACCCGCGC
GCGGAGGATC TCGCCGATGC CGGGGATGAG GATCTGCTGC GTCGCTTGGC CGTGATCAAG
GACGACGGGA TGCTCACCAA CGCGGGGGCG CTGCTCTTCG CGGCGAGGCG CGCAGCTGCG
GTGGATCACA TCCGACGGCC CGGCGCCGGC GCGGACAGCG AGGAGCGGAT CAATGAGCCA
GGACGCTCCG TGCTCGAGGA GCTCGCGGAC GTCTTCGCCG CAGTGCGGGC GTACAACCCT
GAAGTCCATG TGGAGCAGGG CCTGGTGATC GGGCGCGTCC GTGCCCTGCC CGAGCGCGCC
GTGCGCGAAG CGATTGTCAA CGGCATCGCA CACCGCGAAT GGACCGACGA GAAACCGACC
ACTGTGGAGC ACATCGGGAG AACCCTCCGC GTGACGAGTC CGGGCGGGTT CTACGGGGGT
GTCCGCAGCG ACAACATCAT CAACCACCCG CCGGTCTCCC GGAACAAGGA TCTCAGCCAG
CTCCTGGCCA CCCTGCGCAT CGCCGAGCGG CAGGGCGTGG GGGTGGACCG CATGTTCGCG
GACATGATCC GTCACGGGCA TCCCTCTCCC GTCATCGAGG AGGTGGATGG CGTCTCGGTG
CGTACGGTGC TGGCCGGGGA ACGCCCGGAT CTGGGCTGGA TACGCTGGAT CGCCGAGATC
GTTCCCGATC CGCGCCGGGA CCTTCGCGTC CTGATGGCGC TGCATCACCT GGCCGCGCAG
CAGTGGACGG ATCCTATGGA CCTGGCGCCG GTGCTCCAGC TGACACGCGA GGAGTCCCGG
CAGACGGTTC AGCGCTTGCT CGACCACCGT GCGGGGGGAA GCCCGATCTG CCACGAGATC
GACGGGGTCC CGGACTCAGC GCCGATCCCC TCCGTAGCGA TGGGAGCGGC GGCCTCCACG
GACCTCGTCG GGCTGCGCCG GGACGCCGGG CTGAGGAGCC GGCCGCTCAG CAGGGAACAG
ATAGCGCGCT CGTATGCTAG CGCCCGGGGC AGGATCAGCA CCACGGAGCT GGGCAGCATC
GTCGGTGCGG CGCGGACGAA CGTCGGAGCG GTGCTGCGCG GGCTCGAGGA GCAGGGAGCG
CTCGAGCCAT CGCGTGAGAA CCGCCGAGGG CCCGGCTTCT TCTACCGCTA TGTGGCGGAC
GACGCCTGA
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| Protein sequence | MTQFGVDPVA DAVDAALRAV ERGENPSERR LFDFKEEAGR RGADGTLRPG DPHNDPAARK
LAGEVACMAN SVGGGALIVG IGADGTPIGA VLDADWLQVR LFQLLQQSYT TVVTPAQVCG
ARVLIIRCPP AVEPIRWQNR ITWRVGDQCQ DIDPATWHER RARSWGYDWS AQSSGLAPSQ
VRPQAVLIAR GFLQSSGDPR AEDLADAGDE DLLRRLAVIK DDGMLTNAGA LLFAARRAAA
VDHIRRPGAG ADSEERINEP GRSVLEELAD VFAAVRAYNP EVHVEQGLVI GRVRALPERA
VREAIVNGIA HREWTDEKPT TVEHIGRTLR VTSPGGFYGG VRSDNIINHP PVSRNKDLSQ
LLATLRIAER QGVGVDRMFA DMIRHGHPSP VIEEVDGVSV RTVLAGERPD LGWIRWIAEI
VPDPRRDLRV LMALHHLAAQ QWTDPMDLAP VLQLTREESR QTVQRLLDHR AGGSPICHEI
DGVPDSAPIP SVAMGAAAST DLVGLRRDAG LRSRPLSREQ IARSYASARG RISTTELGSI
VGAARTNVGA VLRGLEEQGA LEPSRENRRG PGFFYRYVAD DA
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