| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_27740 |
|---|
| Symbol | |
|---|
| ID | 8401318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3105958 |
|---|
| End bp | 3107124 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644998810 |
|---|
| Product | glycine/D-amino acid oxidase, deaminating |
|---|
| Protein accession | YP_003156130 |
|---|
| Protein GI | 257069875 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAC TTCCCGCTTC CTCCACCTCC GCTGCTGGTC TCTCCCGCGG CTCGAGCGCA
GCTCCCGAGA GCGTGATCGT GCTCGGAGGG GGAGCTCTAG GCGCCTCGAT CGCCACCCAC
CTCGCGCAAG CCGGTGCCTC AGTGACGCTC GCGACCGCAG GCGAGCTGTG CGACGGTGCG
TCCAGCCGAT CGCTGTCCTG GCTGAACTCC GCAGGTGACC GCAGCCCCGC TTACCATGCC
CTGCGCGTGC ACGGCATCGA TCGGTACCGC ACCCTGTTCG CTGCGGATCC CTCTTGCGAG
TGGCTGCGGT TTTCAGGCGG CCTCTGGTGG GGCACCGACG CTTCCTCCGC CGCCACCCAC
GACCGGCACG CCGGCGAAAT TGGACGCGGC TACGCCTCCG AGCTGCTCGA CCGGGGAGAG
GTCGCGCGCC GCTTCCCTGA CCTCGACACG GGGGTCATCG CCCCGGAAGC AATCGTCAAC
CCCGGCGAAG GCTGGGTATC GCTCCCCCAT CTTGTCGAAC ACCTCGCGGC CAAGCTCCGC
GACCTCGGCG GCACGATCAC TACCGGTCTC GGACCGTGCT CGCTCATAGT GGAGGATGGC
CGTGCTATAG GGATCCGCGA CCAGAGGGGA GCGGAGCACC GGGCCGGCGC CGTGGTCGTC
GCATGCGGCG CCAAGACCCC TGCAGTGATG AACCGGGCCG GAGTGGACAT CCCCGACGGG
TCGCCCCTGT CAATGATGGT CACAACCGAC CCTGTCGATG CCGAGGCTCC CGTGATGAAC
ACGCCCCGCG CAGCGGTGCG CCCGAATCCT GGGGGCTCGT TCTGTGTCGA TCATGACTGG
TACGTCGGAG ACATCGTTGA GCACGAGGAC GGCACCTGCA CCATTGACGA ATCCATCGTC
GCGGAGCTGC TTGAGGAGGC ATCGCGCCTC TTCGCGGGCG GTGTCTCGCT GACTGCGGCG
CGCTGGGCGG CCGGGCGGAA GCCCATTCCT GGCGATGGTG AGCCAGTGCT CGGCGCAGTC
GGAGCGCTGC CCGGCTGCTA CGTGGCCTTC ACCCACTCCG GCGCGACGCT TGCTCTCATC
GCCGGTGAGA TGGTGACCCA CGAGGTCATG ACCGGGAACC GCCACCCGAT GCTCGCGTCG
TTTTCCCCGG ACCGCTTCGC ATCGTGA
|
|---|
| Protein sequence | MNSLPASSTS AAGLSRGSSA APESVIVLGG GALGASIATH LAQAGASVTL ATAGELCDGA
SSRSLSWLNS AGDRSPAYHA LRVHGIDRYR TLFAADPSCE WLRFSGGLWW GTDASSAATH
DRHAGEIGRG YASELLDRGE VARRFPDLDT GVIAPEAIVN PGEGWVSLPH LVEHLAAKLR
DLGGTITTGL GPCSLIVEDG RAIGIRDQRG AEHRAGAVVV ACGAKTPAVM NRAGVDIPDG
SPLSMMVTTD PVDAEAPVMN TPRAAVRPNP GGSFCVDHDW YVGDIVEHED GTCTIDESIV
AELLEEASRL FAGGVSLTAA RWAAGRKPIP GDGEPVLGAV GALPGCYVAF THSGATLALI
AGEMVTHEVM TGNRHPMLAS FSPDRFAS
|
|---|
| |