| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_22540 |
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| Symbol | |
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| ID | 8400800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 2533689 |
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| End bp | 2535296 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644998312 |
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| Product | choline oxidase |
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| Protein accession | YP_003155643 |
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| Protein GI | 257069388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.155737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCAC AGAACCCCAG CTCCCAGAGC CCCGTCTCCG AGAACCCCGT CTCCGAGTTC
GACTACGTCA TCGTCGGCGG CGGCTCCGCC GGTGCCGCCC TGGCGGCGCG TCTGAGCGAG
GATCCGGCCG TGCAGGTCGC GCTCCTCGAG GCCGGCCCCT CCGATCTCGA GCACGAGGAG
GTGCTGCAGC TCAAGCGCTG GCCCGAGCTG CTCGAATCCG GCCTCGACTG GGACTACCCG
ATCGAGCCGC AGGAGAACGG CAACTCCTTC ATGCGCCACG CCCGCGCGAA GGTGCTGGGA
GGCTGCTCCT CGCACAACTC CTGCATCGCC TTCCACCCGC CGGCGGAGGA CATGGACCTG
TGGGAGGAGC TCGGCGCCGA GGGCTGGAAC GCCGAGACCG TGATGCCGCT GATCGAGCGC
CTGGAGACCA ACCGGGACCG CAGCGGTGAG GGCCACGGCA CCTCCGGCCC GGTGCACCTC
ATGGACGTGC CTGCCGAGGA TCCGCTCGGC GTGGCGCTGC TGGACGCGTG CGAGCAGGCG
GGCATCCCGC GGGCGCGGTT CAACGACTTC GAGACCGTGG TCAACGGCGC GAACTGGTTC
CAGGTGAACC GTCAGGACGA CGGCACCCGG GCCTCCTCCT CCGTCTCCTA CCTGCACCCG
AACTTCGAGC GGGAGAACCT GCACGTCCTC ACCGGCATGC ACGTGATGCG GGTGCTCTTC
GACGAGGAGC AGCGCGCCAC CGGCGTGGAG TACATCGACA ACGCCTTCGA CCGCTCCTCG
CGCATGCACG CGCGCCGCGA GGTGATCCTC TCCGCCGGGG CGATCGACTC CCCGAAGCTG
CTGATGCTCT CGGGCATCGG CCCCGCCGAC CACCTGCGCG AGGTGGGCAT CGACGTGCGT
GTGGACTCCC CCGGCGTCGG CTCGAACCTG CAGGACCATC CCGAGGCGGT CATCTCGTGG
GAGTCCACGC AGAAGATGAC CCGCGAGTCC ACGCAGTGGT GGGAGATCGG CATCTTCACC
CCCACGCAGG AGGGCCTGGA CCTGCCGGAC CTGATGATGC ACTACGGCTC GGTGCCCTTC
GACATGCACA CCCGCCGTCA GGGCTACCCG ACCTCGCCGG AGTCCTTCGC GCTGACCCCG
AACGTCACCC ACGCCCGCTC GCGCGGCACG GTGCGGCTGC GGTCGATCGA CTACCGCGAC
AAGCCGAAGG TCGATCCGCG CTACTTCACC GACGAGGAGG GCCATGACAT GGCCGTCGCC
GTCGCCGGGA TCCGGAAGGC GCGCGAGATC GTCTCCCAGC CGGGGATGGA TGCGTTCCGC
GGCCGGGAGC TGTTCCCCGG CGAGGACGTG CAGAGCGACG AGGAGATCGC CGACTACGTC
GCGAAGACCC ACAACACCGT CTACCACCCC GCCGGCTCGT GCCGCATGGG CGCGGTGGAC
GATGACATGT CGCCCCTGGA TCCGCAGCTG CGGGTCAAGG GCGTGACCGG TCTGCGCGTG
GTCGACGCCT CGGTGATGCC GCAGCTGGTC GCCGTGAACC CGAACATCAC CACGATGCTG
ATCGGCGAGC GCGCCGCGGA GCTGATCCGC GGCGAGCAGA GCGCCTGA
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| Protein sequence | MSSQNPSSQS PVSENPVSEF DYVIVGGGSA GAALAARLSE DPAVQVALLE AGPSDLEHEE
VLQLKRWPEL LESGLDWDYP IEPQENGNSF MRHARAKVLG GCSSHNSCIA FHPPAEDMDL
WEELGAEGWN AETVMPLIER LETNRDRSGE GHGTSGPVHL MDVPAEDPLG VALLDACEQA
GIPRARFNDF ETVVNGANWF QVNRQDDGTR ASSSVSYLHP NFERENLHVL TGMHVMRVLF
DEEQRATGVE YIDNAFDRSS RMHARREVIL SAGAIDSPKL LMLSGIGPAD HLREVGIDVR
VDSPGVGSNL QDHPEAVISW ESTQKMTRES TQWWEIGIFT PTQEGLDLPD LMMHYGSVPF
DMHTRRQGYP TSPESFALTP NVTHARSRGT VRLRSIDYRD KPKVDPRYFT DEEGHDMAVA
VAGIRKAREI VSQPGMDAFR GRELFPGEDV QSDEEIADYV AKTHNTVYHP AGSCRMGAVD
DDMSPLDPQL RVKGVTGLRV VDASVMPQLV AVNPNITTML IGERAAELIR GEQSA
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