| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_17540 |
|---|
| Symbol | |
|---|
| ID | 8400300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1964233 |
|---|
| End bp | 1965762 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644997818 |
|---|
| Product | ATPase component of ABC transporters with duplicated ATPase domain |
|---|
| Protein accession | YP_003155165 |
|---|
| Protein GI | 257068910 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.047738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAC ACATCTCTGT CCGCACCACC ACCGGCGCTG CGCACCTGCG CGCCCGGGAC
CTCCACCTCG CCCGCGGCGG CCGGGTGTTG CTGCGCGGCG TGGACCTCAC CCTCGCTCCG
GGCGACCGCC TCGCCGTGGT CGGGGAGAAC GGACGCGGCA AGAGCACCCT CCTCGAGGCG
CTCGGCGGCG ACCTCGAACC CGATGCCGGA ACGATCGCAC GACACGGCAG CCTCGGCGTC
GTGCCTCAGG AGCTGGCCGT GGACGCATCC GGTCCGCGCA CCGTCGGCGC ACTGCTCGAC
GAGCTCCTGG CCCGTCCGCT CGGCGTGCTG CACGCTCTCG ACGAGGCGGC CTCGGCGCTC
GGCGAGGACA CCGGGGCCGC CGCGGCGCAG CGCTACGACG ACGCCCTCGC CGCGGCCGCC
GCGATCGACG CCTGGGATGC GCCCCGCCGC CTCCAGGTCG CTCTCGAGGA GGTCGGCGCG
ATCACCGAGC GGGGGCGCCG GCTCGACACG ATGTCCGTGG GCCAGCGCTA CCGGGTGCGC
CTGGCGGGGG TGATCGCCGC CCGGGCCGAT CTGCTCCTGC TCGACGAGCC CACGAACCAT
CTCGACGCCC GTGGGCTCGG CCACCTGACC CAGGCGGTGC GCGAGCATCC GGGGGCGGCC
GCGATCATCT CCCACGACAG GGCGCTGCTC GCCGAGATCG CCACCGGGTT CCTCGATCTG
GACCCGACCA GTGACGGCCG GCCGTTGCTG GTCAGCGGCG GACTGGAGCA ATGGCAGCAG
GCCAGACGCC GTCATCGGGC CGCCTGGGAG GCCGCCCACC GGGCGCAGCA GGACGAGCAC
GAGCGGCTGC AGGCCCAGGC CGAGACGGCT CGCTCCCGCC TCTCCACGGG ATGGCGACCC
GACAAGGGCA CCGGCAGGCA TCAGCGACAG AGCCGCGCCC CGGGCGTGGT GCGGGCGATG
AACGATCGGC TCGATCGTCT CCAGGAGCAT CGGCTCGATG TGCCGACGCC GCCTCCACGG
CTCCGGCTCC CCGCCTCCGA CACCCGGGCA GGGACTCCTC TGCTGCGCGC CGACGGAGTG
GAGGTCGAGC GGGAAGCCGG GCTGCCGCCG CGTCTGGCCT CCACCTCGCT GCGCCTCGCG
GGTGGCGACC GCCTGCTCGT GGTGGGGCCG AACGGCGCCG GCAAGACGAC GCTCCTGCGC
GTCCTGGCCG GGGACCTGGC CCCCACGGTC GGAGCGGTGC GGCGTCTGAG CGATGCGCGC
ATCGGACTGC TCGAGCAGGA GGACGACGGG GCGAGATCAC CCCATCGGGG CAGCCCGGGG
GAGCGCAGAC GGCGGGCGCT GGCCGCGCTG TTCACCGAGC GTCCCGACGT CGCCCTGCTC
GACGAACCCA CCAACCACCT GGGGATCAGC GGCGTCGACG ACCTGCTCGA CGCGCTCGAG
GAGACCCCGT CGGCCGTGGT GCTCGCCACG CATGATCGGT CCGTGCTGCG CGCGCTCGCC
CATTGGCCGC GGCTCGCGCT CGACGGCTGA
|
|---|
| Protein sequence | MTSHISVRTT TGAAHLRARD LHLARGGRVL LRGVDLTLAP GDRLAVVGEN GRGKSTLLEA
LGGDLEPDAG TIARHGSLGV VPQELAVDAS GPRTVGALLD ELLARPLGVL HALDEAASAL
GEDTGAAAAQ RYDDALAAAA AIDAWDAPRR LQVALEEVGA ITERGRRLDT MSVGQRYRVR
LAGVIAARAD LLLLDEPTNH LDARGLGHLT QAVREHPGAA AIISHDRALL AEIATGFLDL
DPTSDGRPLL VSGGLEQWQQ ARRRHRAAWE AAHRAQQDEH ERLQAQAETA RSRLSTGWRP
DKGTGRHQRQ SRAPGVVRAM NDRLDRLQEH RLDVPTPPPR LRLPASDTRA GTPLLRADGV
EVEREAGLPP RLASTSLRLA GGDRLLVVGP NGAGKTTLLR VLAGDLAPTV GAVRRLSDAR
IGLLEQEDDG ARSPHRGSPG ERRRRALAAL FTERPDVALL DEPTNHLGIS GVDDLLDALE
ETPSAVVLAT HDRSVLRALA HWPRLALDG
|
|---|
| |