Gene Bfae_16970 details

Gene Information

• Locus tag: Bfae_16970
• ID: 8400243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachybacterium faecium DSM 4810
• Kingdom: Bacteria
• Replicon accession: NC_013172
• Strand: -
• Start bp: 1896714
• End bp: 1898690
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644997761
• Product: DNA primase
• Protein accession: YP_003155108
• Protein GI: 257068853
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0358] DNA primase (bacterial type)
• TIGRFAM ID: [TIGR01391] DNA primase, catalytic core

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.522082
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCCAGG GACTGATCCG TCGCTCCGAC GTCGACCTCG TGCGCGAGCG CGCACGGCTG 
GACGAGGTCG TCTCCGAGCA CGTCACCCTG CGCACCGCCG GCATCGGCTC GATGAAGGGG 
CTGTGCCCCT TCCACGATGA GAAGACGCCC TCGTTCAACA TCAGGCCCCA GCTGGGGCAC 
TGGCACTGCT TCGGCTGCGG CGAGGGCGGT GACGTGATCT CCTTCGTCCA GAAGATCAAC 
CACCTGAGCT TCGTCGAGGC GGTCGAGATG CTCGCCGGGC GCTACGGCGT CCAGCTGCAG 
TACGAGGACG CCGGGCAGGG GCGCGGCAAT CGCCCCGATT TCGGCACCCG CCGCCGGCTG 
CTGGATGCCC ATGCGATCGC GGAGGAGTAC TACCGCGAGC AGCTCGGCAC CCCTGCCGCC 
GAGGTGGGGC GGCGCTTCCT CACCGAGCGC GGCTTCGATC AGGACGCCGC CGCTCATTTC 
GGCGTCGGCT TCGCCCCCGA GGGCTGGGAC TCTCTCACCG GGGTGCTGCG CTCACGCGGA 
TTCACCGAGG CGGAGCTCAC CGCCAGCGGA CTCGTCTCGC AGGGCCAGCG CGGCGTCTAC 
GACCGCTTCC GCGGCCGGCT GGTGTGGCCG ATCCGCGACA TCACCGGCAA CACCATCGGG 
TTCGGCGCGC GGCGCCTGCT GGACTCCGAT CAGGGCCCGA AGTACCTCAA CACCCCCGAG 
ACCGCGATCT ACCACAAGTC CAGCGTGCTC TACGGGCTGG ACATCGCCCG CAAGGCGATC 
TCCTCCCAGC ACCGGGTGGT CGTGGTCGAG GGATACACCG ACGTGATGGC CGCCCATCTG 
GCCGGCGTCA CCACCGCCGT TGCCTCCTGC GGGACGGCCT TCGGGGCGGA GCACGTGAAG 
ATCGTGCGCC GTGTGATGGG GGACTCCAAT CCCTCGGCCG GGCTGCGGCT GAACACCGAC 
GGCCGGGGCC TGGCCGGCGA GGTGGTGTTC ACCTTCGACG GCGACGCCGC CGGGCAGAAG 
GCGGCGCTGC GCGCCTTCGA GGAGGATCAG CGCTTCGTCG CCCAGACCTA TGTGGCCGTC 
GAGGCCAGCG GCATGGATCC CTGCGAGCTG CGGATCGCGC AGGGTGACCA GGCGGTGCGC 
GACCTCATCG AGACGCGCCG TCCGCTGTTC GAGTTCGCGA TCCGCACCGC GATCTCGCAG 
GTGGATCTCG ACACCGTCGA GGGGCAGGTC ACCGCGCTGC GGATGGCAGC GCCGGTGGTC 
GCCCGGATCC GCGACCGGGC GATGCGCCCC GAGTACGCCC GCCGCCTCTC CGGCTGGCTG 
GGGATGGACG AGGCGACCGT GCTGCGCGCC GTGCACGATG CCGCCCGCTC CCAGGGCCGC 
GCTCCCCAGC CCGCCACCCC GGCGCGCACG GTCGCGGAGG GGCAGGGCGG CGCCGGGCAG 
GGGAGTTCGG CGGAGGACGC CCCGATCCCC TCGGCCCGGC TCGCCGACGT GGTCAGCCCT 
CGCGACCCGG TGGGCCAGGT CGAGACCCAG TCGCTCGCGG TGATGCTGCA GTCCCCGCAG 
CTGCTGGAGG ACGAGAAGGT CGCCTCGCTG CCGGATGACG CCTTCCACGT GCCGGCCCTG 
CAGGGAGTGT GGGACGTGAT GCTCGCCGCC GGCACGCTGC TGGACGCCGT CCAGGGTCGG 
CTCCATGCCG CCCGGTACCT CGAGCAGGTC CTCGAGATCG CCGGGGAGAC GGTGCGCCCG 
CTCATCGTGG AGATCGCGAA CCTCGACCTG CCGGCCCGGG ACGAGGAGGG CCTGCGCCGC 
CTCGCCCATT CGCTGCTGGA CCGGCTCACC GAGCTGTCCA TCACCCGCGA GTACTCGGTG 
CTCAAGCAGC GCCTGCAGCG CACCGATCCC TCGGACGCCG AGCGCTATCA GGACATCATG 
GCGCGCCTGG CCCAGGTGCA GGGCCGCCGC CGCGCCCTTC GCGCGAGCGG GGAGTGA 

 

Protein sequence

MAQGLIRRSD VDLVRERARL DEVVSEHVTL RTAGIGSMKG LCPFHDEKTP SFNIRPQLGH 
WHCFGCGEGG DVISFVQKIN HLSFVEAVEM LAGRYGVQLQ YEDAGQGRGN RPDFGTRRRL 
LDAHAIAEEY YREQLGTPAA EVGRRFLTER GFDQDAAAHF GVGFAPEGWD SLTGVLRSRG 
FTEAELTASG LVSQGQRGVY DRFRGRLVWP IRDITGNTIG FGARRLLDSD QGPKYLNTPE 
TAIYHKSSVL YGLDIARKAI SSQHRVVVVE GYTDVMAAHL AGVTTAVASC GTAFGAEHVK 
IVRRVMGDSN PSAGLRLNTD GRGLAGEVVF TFDGDAAGQK AALRAFEEDQ RFVAQTYVAV 
EASGMDPCEL RIAQGDQAVR DLIETRRPLF EFAIRTAISQ VDLDTVEGQV TALRMAAPVV 
ARIRDRAMRP EYARRLSGWL GMDEATVLRA VHDAARSQGR APQPATPART VAEGQGGAGQ 
GSSAEDAPIP SARLADVVSP RDPVGQVETQ SLAVMLQSPQ LLEDEKVASL PDDAFHVPAL 
QGVWDVMLAA GTLLDAVQGR LHAARYLEQV LEIAGETVRP LIVEIANLDL PARDEEGLRR 
LAHSLLDRLT ELSITREYSV LKQRLQRTDP SDAERYQDIM ARLAQVQGRR RALRASGE